Oryzias melastigma (Indian medaka): 112139089
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Entry
112139089 CDS
T07439
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oml02000
]
112139089
03037 Cilium and associated proteins [BR:
oml03037
]
112139089
Transporters [BR:
oml02000
]
Other transporters
Pores ion channels [TC:
1
]
112139089
Cilium and associated proteins [BR:
oml03037
]
Other cilia and associated proteins
Stereociliary proteins
112139089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF6985
Orf78
Motif
Other DBs
NCBI-GeneID:
112139089
NCBI-ProteinID:
XP_024117555
LinkDB
All DBs
Position
LG15:complement(29974852..29995514)
Genome browser
AA seq
1108 aa
AA seq
DB search
MSSVSDPPDGSRSSSAARRHRSVRKSSRRIFSSYQDHQQLSSDDEGKDEERVDSNDPEEM
FQNIQFQKEIIANIRSRPWPMRRKLKVLKQAREIVLKYEGRLTRTRGYQTAGADLLKKIS
RLLYNIVVLFIPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTVMTGAFVVLPELLA
GAPFGTTRSKTIPKEHMASAQDLDTIWSLGGYLQYSVLFYGYYGRVRKIGSAGYRLPLAY
FLVGMAVFAYSFIILLRKMARNSRLSLASASDENFTFCWRIFCAWDYLIGNPEAAESKGA
AIVNNIREAIVEEQQKKRETSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQE
KPELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYSL
IIALLDKVNIMSSALPPSLSNWSDSSSFLATVSQSEMVSVSTQAKVPVSPHHSSTTATLT
AITAVLNVSYRNNVGTSVNHTAVFEKNNRSQQDQCWETYVGQEMLKLSIIDMIFTVASIL
LIDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAF
NVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIARYKP
SQHCGPFSGQEKIYDIISETVASDFPLWFSKVMSYVSSPVVVLPAVLLLFMLIYYLQAIA
RSLKFTNNQLRLQLQTERMEDKKKVFQLAAAKLQTPETTEEQKPDQQLSDAASPGASVHT
GSPGSDGSEVNLQSPANSSNNIQTIAQAASRPDLSRGGQSPAATGASKAQPPHLPNRRGL
HALHPVQAAGTASAPSYDACRTHSTRLVFVNEHEPRKKLLRSATRIPRHYVVEKPAEILE
LYPRNVRRYTPRPAHHLPHPHRCHTSQHLTRCDGDRERSRTVLGKVARPRSLSDLQQQTQ
FYLRKHLEGHKDGLRVRYAVQENDLEDGEVDWGDPELHSSSRSSLRTEPAVVRTRHHVYS
PGGRCPSAVRNKTGESSNKRNLKKHLETESDSASLASSSDQQNSSSDQYLQVIHSKQHQL
RSESTLSKHRSESSFSCSPADGFVCSNV
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgagttcggtctcagacccgccggacggcagcaggtcctcgtctgcagcccggagacac
cggagtgtgaggaagtcgtccaggaggatcttctcttcctaccaggaccaccagcagctc
tcctcagacgatgaaggcaaagatgaggagcgggtggacagcaacgatccagaggaaatg
ttccagaacattcagttccagaaggagatcatcgccaacatccggagccggccctggccc
atgaggcggaagctgaaagtcctgaagcaggccagagagatcgttctaaagtatgagggc
cggctgaccagaaccagaggataccagacggcaggagcagatctgctgaagaagatctcc
cgtctgctctacaacatcgtggttctcttcatcccatgggaagtgaggatcaagaagatc
gagagtcactttggctccggtgtggcgtcctacttcatcttcctccgctggttgtttggc
atcaacatcgtcctgaccgtcatgacaggagcctttgtggtgctgccagagctgctagct
ggagccccgtttggaaccaccagaagtaaaacgatccccaaggagcacatggcctctgct
caggacctggacaccatctggtctctcgggggttacctgcagtactcggtgctcttctac
ggttactatgggcgtgtgaggaagattggcagtgccggctacaggctgcctttggcttac
ttcctggtgggaatggccgttttcgcctacagtttcatcatcctgctgcggaaaatggcc
aggaactcccggctcagcttggccagcgcgtccgatgagaacttcaccttctgctggagg
atcttctgtgcctgggactacctgatcggaaaccccgaggctgcagaaagcaaaggcgcc
gccatcgtcaacaacatccgggaggccatcgttgaagagcagcagaagaagagagaaacc
agtttggcggtgctcatcagtctgcggatcttagccaacatcctggtgctgctgtccctc
gccggcagcatctacatcatctactttgtggtggaccgctcccagaaactggaacaggag
aagccggagctgacgttgtgggagaagaacgaggtcagcgtggtggtgtctctcatcacc
atgatcgctccttctgcctttgaacttgtggctcaactggagatgtaccacccgagaacc
tcgctgagattccagctcgccagagttctggttctatacctgggaaacctgtacagcctc
atcattgctctgctggataaagtcaacatcatgagctctgcactcccaccaagcctctct
aattggtcagactcgtcctccttcctggccaccgtgtctcagagtgagatggtcagcgtc
tccacccaggcgaaggtcccggtgtctccgcatcactccagcaccacagccaccctcacc
gccatcaccgccgtgctgaacgtcagctacaggaacaacgtggggacctccgtcaaccac
acagctgtgtttgagaagaacaaccgttcccagcaagaccagtgctgggagacctatgtg
ggacaggagatgctgaagctctccatcattgacatgattttcaccgtggccagcatctta
ctgatcgacttcatccgggggctggtggtccgatacctgagcgactgctgctgctgggac
ctggagagcaaatttcctgaatacggagaattcaaaattgcagagaacgtccttcatctg
atctacaaccagggaatgatctggatgggggccttcttctccccctgcctccctgccttc
aacgtcctcaagctcatcggtctgatgtacctgcgcagctgggccgtcctcacctgcaac
gtcccccaccagcaggtgttccgagcgtccaggtccaacaacttctatttggccatgctg
ctcttcatgctcttcctgtgcatgttgcccaccatctttgccatcgcgaggtacaaaccc
tctcagcactgcggacccttcagtggtcaggagaagatctatgacatcatctcagagacg
gtggccagcgacttccctctgtggttcagcaaagtgatgagttacgtcagcagcccagtg
gtggtcctgccggcggtgctgctgctgttcatgctgatttactacctgcaggctatcgcc
aggtcgctcaagttcaccaacaaccagctgagactgcagctgcagacggaacggatggag
gacaagaaaaaggtcttccagctggctgcagcaaaactgcaaaccccagagaccacggag
gaacagaaacccgatcagcagctgagcgacgcggcgagcccgggagcgtccgtgcacacc
ggttctcccggatcagacggtagcgaagtgaacctccagtctcctgctaacagcagcaac
aacatccagaccatcgcacaggccgcatcccggccagacctgagcagaggaggccagagt
ccagcagcaacgggagcttctaaagcccagcctcctcacctgccaaacaggaggggcttg
catgcgctccaccccgtgcaggctgcagggaccgcttcagcgccgagctacgacgcctgc
cgcactcactccacccgcctggtgttcgtcaacgagcacgagccccggaagaagctgctg
cgctcggccacgcgcatcccacgccattatgtggtggaaaagccggcagagatcctggag
ctgtacccgcgcaacgtccggcgctacacgccccgccccgctcaccacctgccacaccct
catcgatgccacacgtcgcagcatctcaccaggtgtgatggtgacagggagcggagccgg
acggtcctggggaaggtcgcccgtccgcggtccctgtccgacctgcaacagcagacccag
ttttacctccgcaaacacctggaaggccacaaggacggcctccgtgtcaggtatgcggtt
caggagaatgacctggaggatggggaagtggactggggagacccggagctccactcttca
tcccgaagcagcttaagaaccgaacctgctgtggtccgaacccggcaccacgtctactcc
ccaggaggacgatgtccgtccgcggtccgaaacaagaccggagagtccagcaacaagcgg
aacctgaagaagcacctggagaccgagtccgactcggcctctctggcctccagcagcgac
cagcagaacagcagctcggatcagtacctgcaggtcatccacagcaagcagcaccagctc
aggtccgagtccactctgagcaagcacaggtctgagagcagcttcagctgcagcccagca
gacggtttcgtctgctccaacgtctga
DBGET
integrated database retrieval system
