Oryzias melastigma (Indian medaka): 112139091
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Entry
112139091 CDS
T07439
Symbol
il16
Name
(RefSeq) pro-interleukin-16
KO
K22628
interleukin 16
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112139091 (il16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oml04052
]
112139091 (il16)
Cytokines and neuropeptides [BR:
oml04052
]
Cytokines
Interleukins
112139091 (il16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112139091
NCBI-ProteinID:
XP_036071510
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All DBs
Position
LG15:29944968..29971612
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AA seq
1205 aa
AA seq
DB search
MERRCGDPEAGRTSRKLAILPRALVLCRSKTYEDHPEDRSSARLIDVSRVKRNSGQQGWG
GTQRPPSHNQEGNTATSPQSSCGEVRRGIRISIGFKESCIWRMCVTRGSAEEVHDRGMKT
EDQNLHQDPKTRGQVHRTFSFMAQSQLALFGGPHHSSSGMDSDEMSSPPAEKGVLFSSPE
PPSLSGLADERLASNNNHLKMFIQDKENQNQQTQSPGARSTAASVCPYWIGDLNSLVLKT
TDSGRAAFSGKKKSLSQQLDCYCPQSQSVHRPRRCWSSAQLFSSCGCVHAFAIGTIVLMK
SPEQGLGFSIVGGRDSLHGPMGIYVKTIFPAGAAAADGRLQQGDQILEVNGEALRGLTHS
EALQTFKQVRKGLLTLVVRTTLRGRGLCGPVPRLCESRSFSSAASEAGLGSGHGPRSAID
CSRSGSGPGRPVKPRDRVMMEVVLQKELGVGLGIGLCCVPSDITCAGIYIHTLSPGSTAH
MDGRLRFGDEIVEINDTLVHSATLDDVYSLLSTCREGPVDIIISRHPDPEVSEQQLRTAI
AQAVDASQLRRGRSHWSMDVLAGTCRVFPHSHQRSNPPVQKTMTRSWSDGSNGQRYVCPP
QRHKHQIYPDPSPASTDTPESSSREWAEQHWRSWLQDATSEDGYIGDSSSSSRGSPVTDF
TGPGVSPPAGGQEAAGRADAARRGAESSSHPDGEFSLQLQLTAPSDVLGSLQNPRVLLPD
TPPEEPPSQPGRQSPHSISAAMTDPENLLERNGPPSLCPTSGDGDEAPKLSEPKKGPPVA
PKPTWFSQSLRKMRDEELKSFGGRAAPPPTRMSIKQKIHSFENFSSPDGGEGGGSRRPVA
PCTPPPAVEKEGRCASRGMEEVRFPAERQPDAQQNHTAVSAEAPLLQEHPEAGSTGTGQP
PDEPPRPARPPGLAPVCGDDSAKSCRDRLTDASLKPTERDSESASAPPTEGRAVAPPTEG
RAVAPPTEGRAAAPQDGEAFRKILIFSTQVPLPPFGGCLQDIHVVILLKEEGAGLGFSIA
GGCDLESKAPTVHRVFPSGLAAQEGTIRVGDQLLSINGQALQDVTHTAATAALRLGRSLK
LAVVVVYKRAKEVGGASGGEDAASAAEEQGALLSIELEKGAGGVDFTLEGGKGSIHGDRP
LLVNRIVEGGAAEQSGLRRGDELLMLQGVELQDTTRFEAWNAIKALPPGPFTLLVRRREA
APQDG
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaggtgtggggacccggaggcaggcaggacctccaggaagctggccattctc
cccagggctctggttctctgtcgctccaaaacctatgaagaccatccagaagacagaagt
tccgccaggctgatagacgtgagtcgagtgaagaggaacagtggtcaacaaggctggggg
ggcacacagagaccccccagccacaatcaggaaggcaacacagccacaagcccacaatcc
tcctgtggggaagtcaggaggggcatcaggatctccatcggcttcaaggagagctgcatt
tggaggatgtgtgtcaccagaggttctgctgaggaggtccacgaccgcggcatgaagacg
gaggaccaaaacctccaccaggacccaaagaccagaggacaagtgcacagaaccttcagc
ttcatggcccaaagccagctggctctttttggtggacctcaccacagctcctctgggatg
gacagcgatgagatgtccagccctccagcagagaaaggggtgctgttttcgtctcctgag
cccccgtccttatctggactcgcagatgagcggctggcgtccaacaacaaccacctgaag
atgttcatccaggacaaggagaaccagaaccagcagacccagagccccggtgcccgctct
actgctgccagtgtctgtccgtactggatcggggatctgaacagcctggttctgaagacc
acagactctggaagagctgctttttcagggaagaagaagtccctgtcccagcagctggac
tgctattgcccccagtctcagtctgttcaccgaccgcggcgctgctggagctcagctcag
ctgttcagttcctgcggctgcgtgcacgccttcgccatcgggaccatcgttctgatgaag
agcccggaacagggtctgggcttcagcatcgtggggggcagggacagcttgcacggacca
atgggcatctacgtgaagaccatcttccctgcaggagccgccgcggcagacggacggctg
cagcagggagaccagatcctggaggtgaatggagaagccctccgtggtctgactcacagt
gaagctctgcagacgttcaaacaggtcaggaaggggctcctgactctggtggtgaggacc
acactgcgtgggcggggcttgtgtggacccgtgccccggctctgtgaatcgaggtccttc
agctcggctgcaagcgaggccggacttggttccggacacgggcccagaagtgcaatcgac
tgcagccggtctggaagtgggccgggtcggccagtgaagcccagagaccgggtcatgatg
gaggtagtcttgcagaaagagctcggcgtgggtttggggatcggactgtgctgtgttccc
tctgacatcacatgtgctgggatctacatccacaccctctctccaggatccacggcgcac
atggacggccggctgcggtttggtgatgagattgtagagatcaacgacacgttggtgcac
agcgccacgctcgatgacgtctactcgcttctaagcacgtgcagagaaggtccggtggac
atcatcatcagccgacacccagacccagaagtttcagagcagcagctgaggaccgccatc
gctcaggccgtggacgccagccagctgaggagggggaggagccactggagcatggacgtt
ctggcaggaacctgcagagtcttcccccacagtcaccagaggtccaaccctccggttcag
aagaccatgacgcgctcctggagtgacggctccaacggacagcgatacgtctgccccccc
cagcgccacaagcaccaaatctaccccgacccctcacctgcctccacggacacacctgag
tcctccagcagagagtgggcggagcagcattggcgttcctggctgcaggacgccacctct
gaggacggctatatcggagactccagcagctccagccgaggttctcctgttacagacttt
actggaccgggagtgtcgccccctgctggaggccaggaagcagcaggaagagcagacgcg
gcgaggcgcggcgccgagtcgtcctctcatccagacggagagttctccctccagctgcag
ctcacagctccttcagacgtcctcggatctctgcagaacccccgggtcctcctgcccgac
acccccccagaagaaccccccagccagcctggaagacagagcccccacagcatctctgct
gccatgacggatccggagaacctcctggaacggaacggccccccctcactttgtccaacc
tctggagatggagacgaggcccccaaactctctgaaccaaagaagggccccccagtggca
cccaaacccacatggttttcccagagtctgaggaagatgagggatgaagagctgaagtcc
tttggggggcgggctgcaccccccccaacccgcatgtccatcaaacagaagatccattcc
tttgagaacttttccagtcctgacggtggagagggggggggcagcaggagacccgtggcc
ccctgcaccccccctcctgcagtggagaaggagggccgctgtgcctctcgtggaatggaa
gaggttcgattcccggcagagcggcagccagacgcacagcagaaccacacggccgtctct
gccgaggcccccctcctgcaggaacatccagaggctggttccaccggaaccggtcagccg
cctgatgaacccccccgaccagcccgccccccaggcctggctccagtctgtggtgatgac
tcagcaaaatcctgcagggatcgtctcactgacgcttcgctgaagcccacagagcgagac
tccgaatctgcttctgccccgcccacagagggccgggccgtggccccgcccacagagggc
cgagccgtggccccgcccacagagggccgagccgcggccccccaggatggagaagcattt
agaaagattctgatcttcagtacccaggtacctctgcccccttttggaggttgtctccag
gacattcatgtggtgattctgctgaaagaagagggggcggggcttggctttagcatcgcc
ggaggctgtgacctggaaagcaaagcccccacagtccacagagtcttccccagcggtctg
gcggcgcaggaaggaaccatccgtgtcggcgatcagcttctgtccatcaacggtcaggcc
ctgcaggacgtcacgcacaccgccgccacggcggcgctgcgtctgggccgcagcctgaag
ctggcggtggtggtcgtctacaagagggcgaaggaggtgggcggagcctctggaggagaa
gacgctgcatctgcagctgaggagcagggggcgctgctgagcatagagctggagaaagga
gctgggggggtcgacttcactctggaaggggggaagggctccatccatggagaccgaccg
ctgctcgtcaacaggatcgttgaaggcggggcggcggagcagagcggtctgcggcgtgga
gacgagctgctgatgctgcagggggtggagctgcaggacaccacccgctttgaggcctgg
aacgccatcaaggccctgccgccgggtccgttcaccttgctggtccggaggagggaggcc
gccccccaggacggctga
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