Oryzias melastigma (Indian medaka): 112139096
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Entry
112139096 CDS
T07439
Symbol
chsy1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
oml01100
Metabolic pathways
Module
oml_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
112139096 (chsy1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oml01003
]
112139096 (chsy1)
Enzymes [BR:
oml01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
112139096 (chsy1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
112139096 (chsy1)
Glycosyltransferases [BR:
oml01003
]
Glycan extension
O-Glycan
112139096 (chsy1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
DUF7164
Motif
Other DBs
NCBI-GeneID:
112139096
NCBI-ProteinID:
XP_024117568
Ensembl:
ENSOMEG00000008376
LinkDB
All DBs
Position
LG15:30189252..30200280
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AA seq
798 aa
AA seq
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MAARSRRAWFGVLLGLVVGFTLASRLILPRASELKKAGHKRKASPAACGVSGAPRRELGG
VPWASPANDPPSGRTSGSRAGSFLFVGVMTAQKYLRSRAVAAHRTWAQTIPGRVEFFSSE
GSDTSVPVPVVALKNVDDSYPPQKKSFMMLKYMHDHYLDQYEWFMRADDDVYIKSERLES
FLRSLNSSEAIFLGQTGMGARDELGKLALEPGENFCMGGPGVIMSREVLKRMVPHIRECL
QEMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEPNKKGYIRELHSSKIHRAITL
HPNKNPPYQYRLHSYMLSRKIAELRHRTVQLHREIVQMGRYGAAEPGREDVQLGVPPSFM
RFNPQQRDDVLEWEFLTGKYLFSSSDSQPPRRGMDSSQKQALDDIIMQVMEMINANAKTR
GRVIDFKEIQYGYRRVNPLYGAEYVLDLLLLYKKHKGKTMTVPVRRHAYLQQTFSRIQVR
EDEEMDAGTLASHINKDSDSLSFLSNSLKMLVPFKLAASGLDQREPKESKVNILVPLSGR
YDIFVRFMANFERVCLIPNLNVKLLVLLFSTDNNTERVKQVELMREYHMKYPRADMEIKP
VAGAFSRALALEVGSTHFTNDSLLFYCDVDLLFSGDFLKRCRTNAALGQQAYFPIIFSQY
DPKVVYAGKVQSSNHYVFTSKTGLWRTYGFGIVCVYKGDLLRAGGFDTSIQGWGLEDVDL
YNKFVQSGIGLFRSVDTGIVHVHHPVVCDPNLEAKQYKMCLGSKASSYGSTQQLAELWLD
KNDHGFRRLEGNDSARTA
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgcagtcgcagagcttggttcggggttctgctgggtctggtggtcggcttc
acgctcgcgtcccgcctcattctcccgcgcgcgagcgagctgaagaaagcgggccacaag
cggaaagccagcccggccgcgtgcggcgtgagcggggctccccggagggagctcggcgga
gtcccgtgggcctccccggccaacgaccccccctccggccgcacgtccgggtcccgggcc
ggaagtttcctgttcgtcggcgtcatgaccgcgcagaagtacctgcggagccgcgcggtg
gccgcgcacaggacgtgggctcaaaccattcctggtcgtgtagagttcttctccagcgag
ggctccgacacctccgttcctgttcccgtggtggctttaaagaacgtggatgactcgtac
ccaccgcagaagaagtcgttcatgatgttaaagtacatgcacgaccactatttggaccag
tacgagtggttcatgagggccgacgacgacgtctacatcaagagcgagaggctggagagc
ttcctgcgcagcctcaacagcagcgaggccatcttcctgggtcagactggaatgggggcc
agagacgagctggggaagctggccttggaaccaggggagaacttctgcatgggggggccg
ggggtcataatgagccgagaggtcctcaaaaggatggtgccccacatacgggagtgtttg
caggagatgtacaccacccatgaagacgtggaggtgggccgctgcgtccggaggtttgct
ggagtccagtgtgtctggtcctatgagatgcagcagctgttctatgagaactacgagcct
aacaagaaaggttacatccgggagctccacagcagtaagatccaccgcgccatcaccctg
caccccaacaagaaccccccctaccagtaccggctgcacagctacatgctgagccgtaag
atcgccgagctgcgccaccgcaccgtgcagctccaccgggagatcgtgcagatggggcgc
tacggcgcggccgagccgggccgggaggacgtgcagctgggcgtgccaccctccttcatg
cgctttaaccctcagcagcgagacgacgtgctggagtgggagttcctgacggggaagtac
ctgttctcgtcttcggacagccagcccccccgccgggggatggactcctcccagaaacag
gctctggatgacatcatcatgcaggtgatggaaatgatcaacgctaacgccaagacgcgg
ggccgggtcatcgacttcaaggagatccagtacggctaccggcgggtcaacccgctgtac
ggcgcagagtacgtgctggacctgctgctgctctacaagaagcacaaaggcaagaccatg
acggttccagtccgcagacacgcctacctgcagcagacctttagccgaatccaggtccgc
gaggacgaggagatggacgccggcacgctggccagccacatcaacaaggactcagactcg
ctgtctttcctgtccaactccctgaagatgctggttccgttcaagctggccgcctccggc
ctggaccagcgggagcccaaagagagcaaggtcaacatcctggtgccgctgtcgggccgc
tacgacatcttcgtccgcttcatggcgaactttgaacgtgtgtgcctcatccccaacctg
aacgtcaagctgctggttctgctgttcagcaccgacaacaacacggagcgggtcaagcag
gtggagctgatgagggagtaccacatgaagtacccccgggccgacatggagatcaagccc
gtggcgggcgccttttccagggctctggctctggaggtaggctccacccacttcaccaac
gactcgctgctgttctattgcgatgtggacctgctcttctccggagacttcctgaagcgg
tgccggacgaacgctgctctggggcagcaggcctacttccccatcatattcagtcagtac
gaccctaaagtggtgtatgctgggaaagtgcagagcagcaaccactacgtcttcacctcc
aagacgggcctgtggaggacctacggctttggcattgtctgcgtctacaagggagacctg
ctgcgggctgggggcttcgacacctccattcagggctggggcttggaggacgtggacctc
tacaacaagttcgtccagtcaggaatcggcttgttccgcagcgtggacaccggcatcgtg
cacgtccaccacccggtggtctgcgaccccaacctggaggccaagcagtacaagatgtgt
ctgggctccaaagcctcgtcgtacggctccacgcagcagctggccgagctgtggctggac
aagaacgaccacggcttccggaggctggagggcaacgactcggccaggacagcgtag
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