Oryzias melastigma (Indian medaka): 112139316
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Entry
112139316 CDS
T07439
Symbol
srpk1b
Name
(RefSeq) SRSF protein kinase 1b isoform X1
KO
K15409
serine/threonine-protein kinase SRPK1 [EC:
2.7.11.1
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112139316 (srpk1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oml01001
]
112139316 (srpk1b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112139316 (srpk1b)
Enzymes [BR:
oml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112139316 (srpk1b)
Protein kinases [BR:
oml01001
]
Serine/threonine kinases: CMGC group
SRPK family [OT]
112139316 (srpk1b)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112139316 (srpk1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Pkinase_fungal
RIO1
Motif
Other DBs
NCBI-GeneID:
112139316
NCBI-ProteinID:
XP_024117831
Ensembl:
ENSOMEG00000023096
UniProt:
A0A3B3E249
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All DBs
Position
LG5:complement(23364919..23391191)
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AA seq
642 aa
AA seq
DB search
MERKVLAIQARKKRAKPRKAGKKPEPHGRGGGSQQGQADAQLPEQDEEILGSDDDEQEDP
NDYCRGGYHHVKIGDLFNGRYHVIRKLGWGHFSTVWLAWDIQEKCFVALKVVKSAEHYTE
TALDEIRLLKSVRNTDPTDPSREKVVQLLDDFKIAGMNGTHVCMVFEVLGYHLLKWIIKS
NYQGLPLPCVKSIIRQVLQGLDYLHTKCKIIHTDIKPENILLTVNEPYIKKMAAEATQWQ
KSGAAPPSGSAVSTAPAAKPMAKMSKNKKKKMKKKQKKQAEQLEKKLQEKEVPADAGEEE
EDEETTETTEDTASSASLSVSATMQDIANHSSTDSTPVEPPIPQPSEQKDEAEKEKSLEV
YLNGHASSPETAVNAEVQETEPCPEQEESQNPNRPEHADAQDPTCQEEVHQTHGGADGLL
QQLPDSLSSEGTVEQKEEKEEKCETQQETEGANPADGESDSAGSLLVNPLKALNADKLQV
KIADLGNACWVHKHFTDDIQTRQYRSLEVLIGAGYSTPADIWSTACMAFELATGDYLFEP
HSGEDYSRDEDHIALIIELLGKVPRKLITAGKYSKEFFTKKGDLRHITKLKPWGLFDVLV
EKYEWSKEEAHSFSSFLGPMLDLVPERRATAAQCLSHPWLAS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaaagtgctggcgatacaagcgagaaagaagagggcaaagcccagaaaagct
ggcaaaaaaccagagcctcacgggcgtggaggtggctctcagcagggtcaggccgacgct
cagctcccagagcaggatgaggagatcctgggatctgacgacgatgagcaggaggatccc
aatgactactgcagaggaggatatcatcatgtgaagatcggcgacctgttcaacgggaga
taccatgtgatccgtaagctgggctgggggcacttctccactgtgtggctggcctgggac
atccaggagaagtgcttcgtggccttaaaggttgtgaagagtgctgagcattacacagag
actgcgttggatgaaatccggctgctcaaatccgtgagaaacacagatcccaccgatccc
agcagagagaaggtggttcagctgctcgacgacttcaagatcgctggcatgaatggaact
catgtgtgtatggtctttgaagtcctgggctaccatcttctaaagtggattatcaagtcc
aattatcaaggcctgcctctgccctgcgttaaaagcatcatcagacaggtcctgcagggc
ttggactacctgcacaccaagtgcaagatcatccacacggacatcaaaccggagaacatc
ctgctgaccgtcaacgagccgtacatcaagaagatggctgctgaagccacgcagtggcag
aagtctggtgctgcgccgccctctgggtctgcagtcagcacagccccagcagccaaacct
atggccaaaatgtccaagaacaaaaaaaagaagatgaagaaaaagcagaagaagcaggcg
gagcagctggagaagaagctgcaggagaaggaggttccagctgatgcaggagaggaagag
gaggacgaggagaccacggaaaccacagaagacacggcttcttcagccagcctctccgtg
tctgctacgatgcaagacattgcaaaccattctagcacagattctactcccgttgagccg
ccgatcccccagcccagtgaacagaaggacgaggcggagaaagaaaagtccttagaagtc
tacttgaatggtcacgcctcctcgccggagaccgcagtcaatgcggaggtacaagagacc
gagccgtgtccagaacaagaggagtcgcagaaccccaaccgtccagaacacgccgacgcc
caggacccaacatgtcaggaggaggtgcatcagacacacggaggagctgacggcctcctg
cagcagctccccgactccctcagctcagaaggaaccgtggaacaaaaagaggagaaggag
gagaagtgtgagacccagcaggagacagaaggagccaatccagcagacggagagagtgac
tctgcaggcagtttgttggtgaaccccctgaaggccctcaacgccgacaagctgcaggtt
aagatcgctgacctcggcaacgcctgctgggtgcacaaacatttcacggatgacatccaa
acacggcagtaccgttctctggaggtgctgattggagccggctacagcacgccggcagac
atctggagcacagcctgcatggcttttgagctcgcaactggagactatttgtttgagccc
cattctggagaagactactccagagatgaagatcacatcgcgctgatcattgagcttctg
ggtaaagttcctcgaaagctcatcacggcgggcaaatactccaaggagtttttcaccaag
aaaggtgacctgcgtcacatcactaagctgaagccttggggtctgttcgacgtcctggta
gagaagtacgagtggtccaaagaggaggcccactctttcagcagcttcctggggcccatg
ctggatctcgtgcctgaacggagggccactgccgcgcagtgtctctctcacccgtggctg
gcgtcctaa
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