Oryzias melastigma (Indian medaka): 112139406
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Entry
112139406 CDS
T07439
Symbol
zgc:158376
Name
(RefSeq) F-box/LRR-repeat protein 19
KO
K10285
F-box and leucine-rich repeat protein 19
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112139406 (zgc:158376)
04121 Ubiquitin system [BR:
oml04121
]
112139406 (zgc:158376)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
112139406 (zgc:158376)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112139406 (zgc:158376)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
LRR_4
LRR_6
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
112139406
NCBI-ProteinID:
XP_024117958
LinkDB
All DBs
Position
LG17:complement(2316404..2326853)
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AA seq
858 aa
AA seq
DB search
MSGSKALSGAASGARRRRTRCRRCQACTRSECGECHFCKDMKKFGGPGRMKQSCLLRQCT
APVLPHTAVCSACGEAGKEDTVDSEEEKFSLCLMECTICNEIIHPSCLKMGKAEGIINDE
IPNCWECPKCHKEGKTSKDQADGSGKRRMDNGEVGRWKLTDDPPPKKKTPLSPEEGGRAE
GGHKRKKEKEQPDSGPKKKMKGGHEKRLKKKPKQEPGESNGLLVSPAGSSGGVPGSSGAS
SSSQSGGAAAGAGTSSADQRSHHREKLERFKRMCLLERRPESSSSSSSSSESDSESDSDN
SLRGEQGGGSSPSSASPVPPSTVFGNSSVSRAERERGRAERDRRLAELGFSASEESEGEG
GRGDDDEREEEQGEGGGDRARRRGGCEVNSRGRKAGMMDEEEEDPPPSERVRKNSSSLPP
PSPLSSNQQPPSSKHDGFMVKARSNGQEARNGRTRGGGGKEGGEKENSSGALTNHRHAGG
GGAKGSGSRSIKVRSNNKNSKNSASIPPSNGAGALGSGLIMSVMAASPCSQSSRLAPRSQ
VMKRSPPAVPSPPRPIQMERHLVRPPPACPEPSCLPLDCGSAHVITRDVWLRVFTYLSQT
ELCVCMRVCRTWSRWCCDKRLWTQIDLSRQRSITPPMLSGIIRRQPVSLNLGHTNISKKQ
LMWLINRLQGLQELNVSGCAWPAVSALCQAVCPCLKLLDLSRVEDLKDTHLRELLLPPPD
TRTAHGEGRAGRFQNLTELRLSGLDLSDSSSRLLVRYTPHLRRLDLSHCANVTDQTVLAL
TSPLSPLRDSLTHISLAGCSKLTEQSVLLLRRCPSLHTADLRCCQLLPPEAAQLLSFPPH
TTSSSFSSSVDGTLLKNT
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagtaaggcgctgagcggagctgctagcggcgcgaggcgcaggcgcacgcgg
tgccggcgctgccaggcctgcacgaggagcgagtgcggcgagtgtcacttctgcaaggac
atgaagaagttcggcgggcccggccggatgaagcagtcctgtctcctgaggcagtgcacg
gcgcctgtgttgccgcacacggcggtgtgctccgcgtgtggagaggcaggaaaggaggac
acggtggactctgaggaggagaagttcagtctgtgcctgatggagtgtaccatctgcaac
gagatcatccatcccagctgtctgaagatgggcaaagctgaaggcatcatcaacgatgag
atccccaactgctgggagtgccccaaatgccacaaggagggcaaaaccagtaaggaccag
gctgacgggtctgggaagcgcaggatggataacggggaggtgggtcgatggaaactcaca
gatgaccctccccccaaaaagaaaacccccctctcccctgaagaggggggtagggctgag
gggggtcacaagaggaagaaggagaaagagcagccagacagcggtcccaagaagaagatg
aaaggtggacatgaaaaacgtctgaaaaagaaacccaaacaggagcccggagagtccaat
ggcctcctcgtgtctcctgcaggatcttctggaggagtcccaggatcttctggcgcctcc
tcctcctctcagtcagggggggcggcggcgggggcggggacatccagtgctgaccagcgc
tctcaccaccgtgagaagctggagcgcttcaagaggatgtgtctgctggaacgccgtccc
gagtcctcctcctcgtcgtcctccagctcggagtccgactcggagtccgactcggacaat
tccctgaggggtgagcaggggggcggctcctcgccatcgtctgcctctccggtcccgccc
tccaccgtatttggcaacagcagcgtgagtcgagcagagagggagcggggccgcgccgag
cgggaccggcgcctcgcagaactgggcttcagcgccagtgaggagtccgagggggagggg
gggaggggggatgatgatgaacgggaggaggagcaaggagaggggggcggggacagagcc
agacggagaggcggctgcgaggtgaattcacgagggcggaaagcggggatgatggatgaa
gaggaggaagacccgcccccttctgagagggtgagaaaaaactcttcctccctcccccct
ccctcacctctctcctccaatcagcagcctccgtcttcaaagcacgacggcttcatggtg
aaggcgcggagcaacgggcaggaagcccgaaacggacggactcggggtgggggggggaag
gagggcggtgaaaaagagaacagcagtggagctctgaccaatcacagacatgcaggagga
ggcggagccaaaggcagcggcagccgcagcatcaaagtccggagcaacaacaagaactcc
aagaacagcgcctccatccccccctcaaacggggcgggggctctgggcagcggcctcatc
atgtcggtgatggcggcgtcaccctgctcgcagtcgtcacgcctcgcgccgcgctcgcag
gtgatgaagcgcagcccgcccgccgtgccctctccgccgcggccaatccagatggaacga
cacctggtgcgcccgccccccgcctgccccgagcccagctgcctgccgctggactgtggc
tccgcccatgtcatcacgcgggacgtgtggctgcgagtcttcacctacctgagccagacg
gagctgtgcgtgtgcatgagggtgtgccgcacctggagccgctggtgctgtgacaaaagg
ctgtggacccagatcgacctgagccggcagcgctccatcaccccccccatgctgagcggc
atcatccgccggcagcccgtctccctgaacctgggtcacaccaacatctccaagaagcag
ctgatgtggctcatcaaccggttacaaggtctccaggagctgaacgtgtccggctgcgcg
tggcccgccgtctccgccctctgccaggcggtctgtccgtgtctgaagctccttgacctc
agcagggtggaggacctgaaggacactcacctgcgggagctactgctcccccctcccgac
accaggacagctcacggcgagggaagggcgggccggttccagaacctgacggagctgcgc
ctgtccggactggacctgagcgactcctcgtcccgcctcctggtccgttacaccccccac
ctgcgccgactggacctgagccactgcgccaacgtgaccgaccagacggtgttggcgctc
acctcccccttgtccccgctgagggacagcctgacccacatcagcctggcaggttgctcc
aagctgacagagcagagcgtgctgctgctgcggcggtgcccctccctgcacacggcggac
ctgcgctgctgccagctgctcccccccgaggccgcgcagctgctctccttccccccccac
accacctcctcctccttcagctcctctgtggatgggacgctcctaaagaacacctaa
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