Oryzias melastigma (Indian medaka): 112139424 Help Entry 112139424         CDS       T07439                                  Symbol casc3 Name (RefSeq) protein CASC3   KO K14323   protein CASC3 Organism oml  Oryzias melastigma (Indian medaka) Pathway oml03013   Nucleocytoplasmic transport oml03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:oml00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     112139424 (casc3)    03015 mRNA surveillance pathway     112139424 (casc3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oml03019]     112139424 (casc3) Messenger RNA biogenesis [BR:oml03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      112139424 (casc3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Btz Motif Other DBs NCBI-GeneID:  112139424 NCBI-ProteinID:  XP_024117990 LinkDB All DBs Position LG17:complement(2564809..2575973) Genome browser AA seq 711 aa AA seqDB search MADRRRRRRRASQDSEDESGSGSGSDSGRSGSPASKARGREVVPEVPAEVRQEAKSEESE CESEDEAEAVLSDYDSAEPEENGSPSEGAEEEEEGYSEEDAVGAAESKPSAAVGEGGQEG KVEGEEEEDRGKEEDKAEEKANLAGERQSGDGQESTDQPETKAAGKPGQQLDDDEDRKNP AYIPRKGLFFEHDVRGPAQEEERPKGRNRKLWKDEGRWEHDRFREEEQAPKSREELIAIY GYDIRNGAGPAYRRQPRQNSSQGRDKRWREGAERPARSWQNRTGAPPSSVPPPSSPSAFP PLSAAQRHTSRTPPSRNRPPHHSLAHPPPQHRNDDAPPQRERQVAKTQPEPTGERGGAAR GGRSAGRGGSSVVVEDVSQEGGAEPDQDSSSAALPQLSRFQAASPRRQEARATAPPLGPD ASPPPERPVERKSYSLARRTRSRPADLGSKQASVEESAAGSASPSSGGGKGWVGGGEGAS QTVGGASELDADVARLSLAGPNWSPNPPSYVRSEIRGLGNPVHLPNAAPQFSNMEDMAAG SNRAKRYSSQRQRAVPEPAPPMHLGVMEGHFYEPMSYQGPIYTHSDGPAPIPPQSMLVQP EMHLPHPGLHPHQSGGPIANPTLYGAPPVSLSPGQPQQLLPPPFYPPPGVMTFPYPTMYP TPQGQSQVTYGGVTYYDTMQQQAQPKPSPPRRTSQPVTVKPPPPEVPFASE NT seq 2136 nt NT seq  +upstreamnt  +downstreamnt atggcggaccggcggcgaaggaggaggcgcgcgtcccaggacagcgaggacgagtccggg tccgggtccggttcggacagtggcaggtcgggctctccggcctcgaaggcgcgagggcgg gaggtggttccggaggttccggcggaggtccgccaggaggcgaagagcgaggagtccgag tgtgagagcgaggatgaagctgaagctgtgctctcagactacgacagcgctgagcccgag gagaacggctccccctcagagggagccgaggaggaagaggagggctacagtgaagaagat gcagtgggggccgccgagtccaaaccctctgctgcggtgggggagggggggcaggagggg aaggtagagggggaggaggaggaggaccgcggcaaagaggaggacaaagccgaggagaaa gctaacctggccggagagaggcagagcggcgacggacaggagtccacggaccaacccgag accaaggctgcgggaaaaccgggccagcagttggatgacgatgaggaccggaaaaacccc gcctacatccccaggaaggggctgttcttcgagcacgatgtgcgcggacccgcccaggag gaggagaggccaaaggggcggaacaggaagctgtggaaggacgaaggacgctgggagcac gaccgcttcagggaggaggagcaagcgcccaagagccgcgaggagctcatcgccatctac ggctacgacatccggaacggcgccgggcccgcctacaggcgccagcccaggcagaactcg tcgcaggggcgggacaaacgctggagggagggggcggagcgacccgcccgctcctggcag aaccggaccggagctccgccttcatccgtcccacccccctcctcaccctctgcgttcccc cccctctcagctgctcagcgccacacctccagaacccccccgtcccggaacagacctccc caccacagtctggcccaccccccacctcagcacaggaacgacgacgcccccccccaaaga gagcgccaggtggcaaagactcagccggagcccacaggggagaggggcggggccgccaga ggggggcgcagtgccgggagggggggctcttctgtggtggtggaggacgtttctcaggag gggggagcagaaccagaccaggactccagttctgctgcgctgccacagctgagccggttc caggccgcctccccccgccggcaggaagccagggctacggccccccccctcggccccgac gcctctcccccccccgagcggccagtggagaggaagtcctactctctggcccgcaggact cggtcccggcccgccgacctgggcagcaagcaggcctccgtggaggagtctgcagcgggg agtgcctcccccagcagcggggggggtaagggctgggtgggaggaggggagggggcgagt cagacggtgggaggagcctcagagctggacgcagacgtggcccggctcagtctggctgga ccaaactggagtccgaacccgccatcgtatgtacgctctgagatcagaggcctgggaaac cctgtgcatctgcccaacgcggccccccagttctccaacatggaggacatggctgccggc tccaaccgggccaaacggtactcctcccagcgccagagggcggtgccagagccggccccg cccatgcacctaggggtcatggagggacacttctacgagcccatgtcatatcagggacca atctacacccacagcgatggccccgcccccatcccaccacaaagcatgctggtccagcct gagatgcacctcccacatccaggacttcatccccaccaatcaggtggccccatcgctaac cccaccctctacggagcccctcctgtgtcgctgtctccgggacaaccgcagcagctgctg cccccacccttctaccctcctccgggggtaatgaccttcccctaccccaccatgtacccc accccccagggtcagtcccaggtgacctacggcggcgtgacgtactacgacaccatgcag cagcaggcccagcccaagccctcgccccctcgccgcacctcccagcccgtcaccgtcaag ccgccccccccagaggttcccttcgcctcagagtga

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