KEGG   Oryzias melastigma (Indian medaka): 112139462
Entry
112139462         CDS       T07439                                 
Name
(RefSeq) torsin-1A-like
  KO
K22990  torsin-1
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:oml03110]
    112139462
   04131 Membrane trafficking [BR:oml04131]
    112139462
Chaperones and folding catalysts [BR:oml03110]
 Other chaperones and cochaperones
  Others
   112139462
Membrane trafficking [BR:oml04131]
 SNARE
  SNARE associated proteins
   Others
    112139462
SSDB
Motif
Pfam: Torsin TOR1A_C AAA KAP_NTPase NPHP3_N AAA_16 AAA_22 AAA_2 AAA_5 AAA_14 TniB NACHT ResIII NB-ARC AAA_7 Viral_helicase1 IstB_IS21 RNA_helicase PhoH VMAP-M1 AAA_30 Sigma54_activat Zeta_toxin ABC_tran Cytidylate_kin
Other DBs
NCBI-GeneID: 112139462
NCBI-ProteinID: XP_024118041
Ensembl: ENSOMEG00000019928
LinkDB
Position
Unknown
AA seq 277 aa
LPGLKADLKNKLFGQHLASRIILKSLNEFMSNDNPEKPLVLSLHGPSGTGKTFVSQLIAK
NIYKEGMNSKFVHFFTSTLHFRHSSLISTYKSQLQQWIKGNVSNCERSMFIFDEMDKMHP
GLIDSIKPFLDYHHKVDGISYRKSIYIFLSNDGAESIIETALDFWRTGRDREEIELKDLE
ESLSFSIFNNEKSGFYHSSLIENNLVDFFVPFLPLEYSHVVQCIMAEMKIRASKGNGKPN
LDVAHKVASELQYLPKIERAFSSTGCKTIQKKLNFYT
NT seq 834 nt   +upstreamnt  +downstreamnt
cttccaggcctgaaggcggatctgaaaaacaaactgttcggacagcatctggcgtctcgc
atcatcctgaaatccctgaacgaatttatgagcaacgacaaccccgaaaagccgctggtt
ctgtcgctccacggcccgtctggcaccgggaagacctttgtcagccagcttatcgcaaaa
aacatttacaaagaagggatgaacagcaagtttgtccacttcttcacgtccacgcttcac
ttccgacattccagtctcatctccacctacaagtctcagctgcagcagtggatcaaaggc
aacgtgagcaactgtgagcgctccatgttcatctttgatgagatggacaagatgcatccg
ggcctgatcgacagcattaagccgttcctggactaccatcacaaggtggatggaatttcc
tacaggaaatcaatctacatctttctcagtaacgatggagccgagagcatcattgagacg
gctttagatttctggcgaacaggacgagatcgagaagagattgaactgaaagatctggaa
gaatctctctccttctccatcttcaacaacgaaaagagtggcttttatcactcaagtttg
atagaaaataacctggtggacttctttgttcccttccttcctctggagtattcgcacgtc
gtccagtgcatcatggctgagatgaagatcagagccagcaaggggaacggcaagccgaac
ctggacgtggcacacaaggttgccagtgaattgcaatatctccccaaaatagagcgagct
ttttcctccacaggatgcaaaacaatacagaagaaactgaacttctacacataa

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