Oryzias melastigma (Indian medaka): 112139478
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Entry
112139478 CDS
T07439
Symbol
sec24a
Name
(RefSeq) protein transport protein Sec24A
KO
K14007
protein transport protein SEC24
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112139478 (sec24a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112139478 (sec24a)
Membrane trafficking [BR:
oml04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112139478 (sec24a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
112139478
NCBI-ProteinID:
XP_024118074
Ensembl:
ENSOMEG00000003429
LinkDB
All DBs
Position
LG14:23503030..23525033
Genome browser
AA seq
1095 aa
AA seq
DB search
MSTAGFNSQNGTGTGQTYANGPTQTPASLHQVPGVSSGMTHQPAYNPMQAKAPTPPGLYP
YQPVPSFNSSPSVQPLLSSPLVGGPPSHTPPLSASPSPGPRLPPGHATPPPPATAVSSGS
YYPSSMAPTWQFNTATQLPGSAASTNVPFRGTVGNHVNPPVSLPAPTSSASFSPTPPPMN
NPQPPGPGIPPTSMHGYTQPGLAPSPGNFMPPHSYPQSRPGFGPPPTGPPPAMKPPPTGA
PVTNATPPPPKADGAVTGNGPQAPNNFNHVENKMAGPTQPGPPSRHVGHYPSLPPGYQST
PHAGPPMHPSQPYTQAAPPYQQPPGGPGPAHLSPSMAAMSLQSSTPEALRVVNLLQERNL
LPLTAVSAPTPCLPQDLQKINCNPEVFRSTLTSIPQSQSLLNKAKMPLGLLLHPFKDLSQ
LPVVTSSTIVRCRSCRTYINPFVSFLDQRRWKCNLCFRVNDVPEEFMYNPVSRSYGEPHK
RPEVQNATIEFIAPSEYMLRPPQPAVYLFVLDVSHNAVETGYLTVFCQSLLENINALPGD
SRTKVGFITFDSTIHFYNLQEGLSQPQMLIVSDIEDIFLPTPDSLLVNLNECKELVQDLL
KSLPNLFMKTMETQSALGSALQAAFKLLSPTGGRMSVFQTQLPNLGMGALQSREDPNQRA
SAKDIQHLSPATDFYKKLALDCSGQQVAVDLFLLSSQYCDLASLGCISRYSAGSVYHYPS
YHHQHNPAQVERFQKDLKRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPN
VNPDAGFAVQMSIEENLDDMQVVSFQAALLYTSSKGERRIRVHTLCLPVVSSLSDIFAGA
DVQAITGLLASMAVDRSVTASLSDARDAMTNAVIDSLSSYRQSVLTIQQPGLLAPACLRL
FPLYILALLKQRAFRTGTSTRLDDRMFAMYQLKYQPLAYSMLMIHPALYRVDDLTDEGAL
NINERTIPQPRLLQLSVEKLNRDGAFLMDAGTVMYLWIGRNCHPNFLTQVLGVPNCSSVP
ENLYLLPELDTAESQRTRAFVGWLRDQRPFFPSIHVIKDESQLKPHFMQNMIEDRTESAL
SYYEFLLHLQQQISK
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgcggggtttaattcgcaaaatggaactgggactggacagacgtacgcgaat
ggtccgacacaaactcctgcatccttgcatcaggtgccgggggtcagctctggcatgact
caccaaccagcctacaacccaatgcaggccaaagctcccaccccgcctggactttaccca
taccagcctgttccctcattcaattcctccccttcagttcaaccgctgctgtccagtcct
ctcgtcggaggccctccatcccatacccctcctctgtctgccagccccagtcctggtcca
aggctgccccctggacacgccactcctcctccccctgctactgctgtgtcttctggtagc
tattacccgagctccatggctccaacatggcagttcaacacagctacccagctcccgggc
tcggccgcttctacaaatgtaccctttagaggcactgtgggaaatcatgtgaatccacct
gtaagcttacctgcaccgacgtcatcagcctctttcagccccacaccaccacccatgaac
aacccccagccccccggcccaggaatccctcccacttctatgcatggatacactcagcca
ggtcttgcaccctcgccagggaacttcatgcctcctcactcatacccacaaagcagacca
ggttttggtcctccacccacaggaccaccacctgcaatgaaacctcctcctactggagcc
ccagtgaccaacgctacaccacctccgcccaaagcagatggagcagtaactggtaatggc
cctcaagcaccaaacaacttcaaccatgttgaaaacaagatggctggtccgactcagcct
gggccgccgagtcgacacgtgggccactatccatccctccctcctgggtatcaaagcact
ccgcatgcaggcccccccatgcatccttcacagccttacactcaggctgctccaccgtac
caacagccgcccggcggccccggcccggcccatttaagtccatctatggcagccatgagc
ctccagtccagcaccccggaggcccttagagtggtgaacctgctgcaggaaagaaacctg
ctgccactgaccgcagtgtcggcgccaacaccctgcctcccccaagacctgcagaagatc
aactgcaacccagaggttttccgtagtaccctgaccagcatccctcagagccagtcgctg
cttaacaaagcaaagatgcctttgggcctgctgctccaccccttcaaagacctttcgcag
cttcctgtggtgacctccagcaccatcgtcaggtgtcggtcctgcagaacctacatcaac
cccttcgtctcattcctagaccagagaaggtggaagtgcaacctgtgctttcgagtcaat
gatgttccagaggagttcatgtacaatccggtcagcagatcatacggcgaaccacacaaa
agacccgaggtgcagaacgccacgattgaattcattgctccttcagaatacatgttgcga
ccgccccaacctgctgtttatctcttcgttctggacgtatctcacaacgccgtggaaacg
ggttacctgactgtgttctgccagtcgctgctggaaaacatcaatgcgcttccaggagac
tcgcggacaaaagtcggcttcattactttcgacagcaccatccatttctacaacctccag
gagggcctttcccagccgcagatgctcattgtgtctgacatcgaagatatctttttacca
acacctgacagccttctagtaaacctcaatgaatgcaaagagctggtgcaggatctgttg
aagagtttaccaaatctgttcatgaagacgatggagacccagtccgctttgggttcagct
ctgcaagctgccttcaagttgctgtcgcccactggggggcgcatgtctgtctttcagacc
cagctgcctaacctcgggatgggggcgctccagtccagagaggaccccaaccagagggct
tctgccaaggacatccaacatttatcgcccgcaacggatttctacaagaagctggccctg
gactgctccggccagcaggtggccgtagatctgttcctgctcagttctcagtactgtgac
ctggcatcactgggctgcatatccagatactcggccggcagtgtttaccactacccctcc
taccaccaccagcacaacccggctcaggtggagcgcttccagaaggacctgaagagatac
ttaaccagaaaaatcggcttcgaggctgttatgaggatacggtgcaccaaaggcctctcc
atccacacgttccacggcaacttctttgtgcgctccacagacttgttgtcgctgcccaac
gtcaaccccgacgccggcttcgcggttcagatgtccatcgaggaaaacctggatgacatg
caggtggtttccttccaggctgctctgctttacacgtccagcaaaggggagaggaggatc
cgagtgcacactttgtgtctccctgtggtcagttctctgtctgatatctttgcgggggct
gatgttcaagccattactggactgttggcttctatggctgtggaccggtcggtgacggcc
agcctgagtgacgccagagacgccatgacaaacgccgtcattgactcgctgtcatcctac
cgacaatctgtgctgaccatccaacaacccgggctgctagcgcccgcctgcctcaggctc
ttcccgctttacatcctggctcttctcaaacagagagccttcaggacgggcaccagcacc
aggctggacgaccgtatgtttgccatgtaccagctgaagtaccagccgctggcctacagc
atgctgatgatccatcctgctctgtaccgcgtcgacgacctgactgacgagggggcgcta
aacatcaacgagcggaccatccctcagcccagactgcttcagctgtctgtggagaagctc
aacagggatggggcattccttatggatgctggaactgtcatgtatttgtggatcggacga
aactgccacccgaacttcctcacacaagtcctgggagttccaaactgctccagcgtgcct
gagaatttgtatctcctcccagagctggacactgcagagtcccagagaaccagagccttc
gttggatggctcagggatcagaggccgttcttcccctccatccacgtcatcaaggacgaa
agccagctgaaacctcactttatgcagaacatgatcgaagaccggacggagtcggccttg
tcctactacgagttcctcctccacctccagcagcagatctccaaataa
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