Oryzias melastigma (Indian medaka): 112139557
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Entry
112139557 CDS
T07439
Symbol
si:dkeyp-23e4.3
Name
(RefSeq) rho GTPase-activating protein 7
KO
K20632
deleted in liver cancer protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112139557 (si:dkeyp-23e4.3)
Membrane trafficking [BR:
oml04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112139557 (si:dkeyp-23e4.3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
START
SAM_2
SAM_1
Motif
Other DBs
NCBI-GeneID:
112139557
NCBI-ProteinID:
XP_024118155
Ensembl:
ENSOMEG00000023653
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All DBs
Position
LG14:complement(29458711..29528535)
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AA seq
1083 aa
AA seq
DB search
MSTPVCEVNSRTLKNENSNSVPVMLDHRRRRVGLTSIHLNPDPSEIEAREACDWLRAAGF
PQYVQLFRDCRFPVDIEWVKRDHPFLDQDALDSLCRRLITLNKCSEMKLELSRMKRRRNV
YQEEDFCTISPNWTYDRHARQWRRLGSSSNVSVLSGSPAHSLDESSCDVIDLQDVCSIRS
SSSSESDGHDGRRLRLAGTTPVTISTPASGDTSRSSSRCSSAYKTASLDTSFSGPPSPST
ASLEADGCLQEKPPRRTGTTLLRRMEKLRLRGAAGLLSPEQSCRPTVGARPVLIQDKFCR
SSPQTPPTSRLSSSPSSPRTISSSSSHSESSSAVSTPSPVTRVRSNCKRSSSSAGIGSSR
NHQTQWGSEDYRNRVNGGPRQVFHLPKGHKPGTFPTALADKHPALSAITDSDSVNWRTGS
FHGYRNRHAAWSLADQGHAPSGVPERLPVLDNRLSVYDNVPDDPHLSESEGGSDAERTSE
ESEVSQLLAGEDVFSALDSVLERISDLQQLVSLWSEDVCRESSRTGSSHDSSTRSCPSSP
SHIHLEVQRPEEAESSRKIPEEPKTRSWRSSRMSQQQRRSSQQNLPPLPPSPGLEVLTVS
QVVQLQKLALLKLTALMDKHSPSSRQGWSWTVPKPPSASRPGGLKVPRVFGAPLLLSLRQ
TGEALPPCISRALLYLRSDCLDQVGLFRKSGVKSRIQLLREQVESDPEGVSFEGQSAFDV
ADLVKQFFRDLPEPVFSSRLCESFLHIYQYVPQDQQLLATQAAVLLLPDENREALQTLLH
FLWDVVSCVDQNQMTPTNIAVCLAPSLFHLTAKKDSRSGHRKHSLGRPDQRDLSENLAAT
QGLAFMITEVQRLFQVPEFWPGQGVGPEESRGGEEEREEQMTRLKRSTQRLLEELREENP
VWENQPGPEPLDLAFRKGWGDAPLRLWRGSVEVDAPHRDVLRRLLREQPLWEPRLLQAAV
IQTLSDHADIYRFLLRGRSPLPPQEHLLLRTWQDDPLCGPLYLSSASTEHPEIQPGGVRV
HVHTCLYLLEPTGAIKTRLTHLCQTDFRGHSPAWDREVGGHCVASRLLAVRDSFRAEFKE
TKI
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgagcacacctgtttgtgaggtgaacagcagaaccttgaaaaatgagaattcaaattca
gttcctgtcatgctggaccacaggaggaggagagtcggtctgaccagcatccacctgaac
ccggacccttcagagattgaagccagagaggcctgtgattggctgcgcgccgctggattc
ccgcagtacgtgcagttgttcagagactgcaggtttcccgtcgacatcgagtgggtgaag
cgggaccaccccttcctggatcaggacgctctggattcgctgtgcagaaggttgatcacc
ttaaataaatgctcagagatgaagctggagctgagcaggatgaaacgaaggaggaacgtc
taccaggaagaagacttctgcaccatcagcccaaactggacctacgaccgccatgcacga
cagtggcgccgcctcggctcctcctcaaacgtctcggttctgtccggcagccccgcccac
tctctggacgagtcttcgtgtgacgtcattgacctccaggacgtctgctccatccgcagc
tccagcagctccgagagcgacggccacgacggacgccgtctcagactggcagggaccacc
cccgtcaccatcagcacgcccgcctcaggcgataccagcaggagctcctcccgctgctcc
tctgcctacaaaacggcgtccctggacacgtctttcagtggacctccttctccttccacc
gcaagtctggaagctgacggctgcctccaggagaaacccccccggaggacgggcaccacc
ctgctgaggaggatggagaagctgaggttgagaggagcagccggcctgctgtctccagag
cagagctgtaggccgactgtaggagccaggccggttctgatccaggacaagttctgccgg
tccagcccacagactcctcccaccagccgcctgtcttcgtcgccttcgtctcctcgcacc
atcagcagcagcagcagtcactctgagagcagcagcgccgtcagcacgcccagcccggtc
acccgggtcaggagcaactgcaaacgctccagcagcagcgccgggatcggctcctctcgg
aaccaccagacccagtggggatcagaggactataggaaccgggtcaacggcgggcccagg
caggtctttcacctccccaagggacacaagcccgggaccttccccacggccctcgctgac
aaacaccccgccctgtccgccatcaccgacagcgactctgttaactggaggactgggagt
ttccatggttacagaaaccggcacgccgcatggtctctggctgatcagggccacgccccc
tccggcgtccctgaacgacttcctgtgcttgacaaccgactgagcgtgtacgacaacgtt
cccgacgacccgcatctgtcagaaagtgaaggcgggagcgacgccgaacgcaccagcgag
gagtcagaggtgagtcagctgctggcaggtgaggacgtcttctctgcgctggacagcgtc
ctggagcgaatcagcgacctccagcagctcgtgtccttgtggtccgaggacgtctgcagg
gagagcagtcggacaggctcctcccacgactcgtctacccgcagctgcccctcctccccc
agtcacatccacctggaggtgcagcgaccggaggaggcagagagcagcaggaagatccca
gaggagccgaagaccagatcctggaggagcagcaggatgagccaacagcagcgccggtcc
agccagcagaacctgccccccctacccccctccccgggtctggaggtgttgacggtctcc
caggtggtccagctgcagaagctggcgctgctgaagctcaccgcactgatggacaaacac
tcgccgtccagcaggcagggctggagctggaccgttcccaaaccccccagcgccagccgg
cccggcgggctgaaggttccgcgggtgttcggggctcctctgctgctcagcctgcgacag
acgggggaggcgctccccccctgcatcagcagagccctgctgtacctgaggagcgactgt
ctggaccaggtgggactcttccggaagtcgggagtgaaatcccggatccagctgctgagg
gagcaggtggagtcggacccggagggagtttccttcgagggtcagtcggccttcgacgtg
gccgacctggtgaagcagttcttcagagacctgcccgagcccgtcttcagcagccggctg
tgcgagagcttcctccacatctaccagtacgttcctcaggaccagcagctgctggcgact
caggcggccgtcctgctgctgcctgacgagaacagagaggccctccagacgctgctgcac
ttcctgtgggatgtggtcagctgtgtggaccagaaccagatgacccccaccaacatcgcc
gtctgcttggcgccgtcgctcttccacctcacggccaagaaggacagcaggtccggtcac
agaaagcacagtctgggccgcccggaccagcgggacctgagcgagaacctggcagccacg
cagggcctggccttcatgatcacggaggtccagagactcttccaggtcccagagttctgg
cccggtcagggtgtcggtcctgaggagtccagaggaggtgaggaggagcgagaagagcag
atgactcgtctgaagcggagcacccagcggctcctggaggagctccgggaggagaacccg
gtctgggagaaccagcccggtccagaaccgctggatctggccttcagaaagggctggggc
gacgcccccctgcggttgtggcgcggctccgtggaggtcgacgccccccaccgggacgtg
ctgcggcgcctgctgcgggagcagccgctgtgggagccccgcctccttcaggccgccgtc
atccagaccctgtccgaccacgctgatatctaccgctttctcctccgggggcggagcccc
cttcccccccaggagcacctgctgctcaggacctggcaggacgacccgctctgcggcccc
ctctacctgtcgtctgcgtccacggagcaccccgagatccagccggggggggtccgggtc
cacgtccacacctgcctctacctgttggagcccacgggggccatcaagacccggctgacc
cacctgtgccagacggacttcagggggcactcgccggcgtgggacagggaagtgggcggc
cattgcgtggcgtcccgcctgctggccgtcagagattccttcagagccgagttcaaagaa
accaagatctga
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