Oryzias melastigma (Indian medaka): 112139571
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Entry
112139571 CDS
T07439
Name
(RefSeq) zinc finger BED domain-containing protein 1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112139571
04121 Ubiquitin system [BR:
oml04121
]
112139571
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
112139571
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
112139571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
112139571
NCBI-ProteinID:
XP_024118164
LinkDB
All DBs
Position
Unknown
AA seq
373 aa
AA seq
DB search
MTPHVTCIAHTINLASQKAFQVKDAARVLSRVRRIVTFFHHSPKATEILRQNQLLLGLPS
HKLIQNVCTRWNSSYDMLDRFLEQQPAVFASLMSREVRRGEDVNTLTEEDLAAVEAIVKL
MKPVKVATALLCEEDNPTLSMVAPVQAKLKKHFKPLNDELHIITEMKVKFLEDFNKRYQG
LQDTLHVASALDPRFKMLSFIDEDKTRDQIYLDTLSEALTLHEKTTEDRQKESEKGPTQR
NPFPGEYSPHNKNETSADDGLPPKKMKALDQMFSDIVETSAPLRSYRDLAKDEVWKYRNR
DALPLDGDVFLWWRDQLDLPMLSSLAKIYLCIPATGVPSERVFSTAGDIVTAQRSLIKEE
HVDQLIFLKTNLK
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgacccctcatgttacatgcattgcccacaccattaacctggcttcacagaaagctttt
caagtgaaagatgctgcaagagtgctgagccgagtgaggagaatcgtaactttttttcat
cacagcccaaaagccactgaaatcctgcgccagaaccagctgctgcttggtttgccatca
cacaagctcattcagaatgtatgcactcgctggaatagttcctatgacatgttggatcgc
tttttggaacaacagcctgcagtttttgcaagtttgatgtcaagagaggtgaggaggggc
gaggatgtcaatactttgacagaagaagatcttgctgcagttgaggcaatagtaaaactt
atgaaaccagtcaaagtggcaacagcgctcctgtgtgaggaagacaaccctaccctctcc
atggtcgctcctgttcaggcaaaactgaaaaagcattttaaaccactcaacgatgagctc
cacatcatcactgaaatgaaggtcaagttcctggaagactttaataaaaggtaccaagga
cttcaggacacgctgcatgtggccagtgctttagacccacgcttcaaaatgttgtccttc
atcgatgaggacaaaaccagagaccagatttacctcgacactttaagtgaggcactaacc
ctacatgagaaaacaactgaggacagacaaaaggaatctgagaaaggtcccacacaaaga
aacccatttccaggtgaatacagtcctcacaacaagaacgagacaagtgcagatgatggc
ctcccccccaaaaagatgaaggctttggatcagatgttcagtgacattgtagaaacgagt
gcacccctgaggtcctacagagaccttgcaaaagatgaagtctggaagtacagaaaccgt
gatgctttgcctttggatggagatgtcttcctctggtggagagaccagctggatctgcca
atgctgtcttcactggctaagatttatttgtgcatacctgccaccggcgttccatcagaa
agagttttcagtactgctggtgacattgttacagcacagcgcagtttaatcaaagaagag
catgttgaccagctaatcttccttaagacaaatctgaagtag
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