Oryzias melastigma (Indian medaka): 112139687
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Entry
112139687 CDS
T07439
Symbol
synj1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00562
Inositol phosphate metabolism
oml01100
Metabolic pathways
oml04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
112139687 (synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
112139687 (synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112139687 (synj1)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
112139687 (synj1)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
112139687 (synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
112139687
NCBI-ProteinID:
XP_024118283
Ensembl:
ENSOMEG00000014322
LinkDB
All DBs
Position
LG14:complement(16296325..16324229)
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AA seq
1694 aa
AA seq
DB search
MAFSKGYRIYHKLDPPPYSVIVETRSRDECLMFESGAVAVLSAAEKEAIKSTYTKIVDAY
GILGVLRLNLGDSMLHSLVVVTGCSSAGKVQDSEVFRVTQTDFISLRNDPGDEDRISEVR
KLLNSGHFYFAWSSTGVSLDLSLNAHRRILEDTTDNRFFWNQSLHLHLKHYGVNCEDWLL
RLMCGSVEIRTIYAGHKQAKACIFSRLSSERAGTRFNVRGANDDGQVANFVETEQVIFLE
DRVSSFIQIRGSIPLFWEQPGIQVGSHRVKLSRGFEANAPAFERHFAALRRLYGKQVIIN
LLGGKEGEHMLSKAFQSHLKASEHAASVKMINFDYHQNVRGGKADKLHSVLKPLLNKFIE
DCGFFYYSGETGIVRTQGGTMRTNCLDCLDRTNSVQAFFGLEMLTKQLEQMGLTEKPQLV
ARFQEVFRTMWSVNGDSISKIYAGTGALDGKAKAGKLKDGARSVTRTIQNNFFDTSKQEA
IDILRLGSTLNSDLADKARALLTTSSLYVTEPVLQSASPRVLLGMCQSYHKYTRPKQIRV
CVGTWNVNGGKQFRSIAFRNQTLNDWLLDAPMKAGHPEFQDSKANPIDIFAIGFEEMVEL
NAGNIVSASTTNQKLWAAELQKNISRDHKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAV
DTVKTGMGGATGNKGGVAIRLLFHTTSICFVCSHFAAGQSQVKERNDDYNEITRRLSFPM
GRLLYSHDYVFWCGDFNYRINLPNEEVKELIRQQNWDALTAGDQLVEQKNAGAIFRGFIE
GKLDFAPTYKYDLFSEDYDTSEKCRTPAWTDRILWKRRKWNFNKTAEEMNVVGASSTAAE
NEEDPEYAWSPGVLQYYGRAELKTSDHRPVVAVIDVDILEVDPESRHQVYKDVIGKQGPP
DGTILVSLCSSGPDDYFSDDLIDELLDKFSSFGDVILIRFVEEKMWVTFLEGYSALAALS
LSASTVLGKVVDIRLRSPGWIKSLEEEMSVERIFGSIPTSASSTLLAEDADVDEDEFDME
GEVDEEVEEILPQHLQPGAGSGPGSSPLPSPRSSPCPSPTHGEPTAPSRPSRSQQPSRPS
QEMEISPLSLRLEFPGPPVDFQPGAPPSGGLEPKRPPPPRPTPPPARPAPPQRPPPPSGA
KSPALPRPDPRAGRGQAAAGAPGPGGAPRPNIPPRAGVISMPPQSRPPPPAHPGAPRPIP
EVHPGAPRPVPDTHPGAPRPVPSAHAKPPDLPLGPPPSGPPPAAPFALKPQTQSPPQPQP
PSSSAPSQLPPPMQPTLPAPLQPQQAGAPPAAAAAAPSGTPAGPQQGLASPKPPPRSRSS
HALPPDAAKPESAPTAQTNGLNGIQREAQWRPNPFDKLALDFHSAPSWHSTQSLSRGSSL
HAPPSVPPSVFSSTTLPSSFSHQSSALLDLQALESSSSSSLSTPSPFASSLLPPPPVPSR
SRSQEMLRSSPNAFVTDPLPARPSSTNPFTGPLTQQQQHRRPLTPDFNFQLQASLQKSSS
AVAPLLVPTPAPTAQLHRTTSLFGPPSNQSARLPESASAPVLPLAPPSSLPPTFALQPQP
APLGPMPKRQWVTFDDELDFSSRAQTQNPVFPSTSIGSQPSRSVFASEPDWLSSASLTSQ
KQLQPSSSVFVSEPDWLSSAPLVPKQQNQPPRSVFDSEPEWLSSAPASLVSKQQNQPSRS
ATVSEPDWLSSSSN
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atggctttcagcaaaggttatcgcatctaccacaagctggatccccctccttacagtgtc
atagtggaaaccaggtcgagggatgaatgcctgatgtttgaatcgggggctgttgctgtt
ctatcggctgcagagaaggaggccattaaaagtacatacacaaagattgttgatgcctat
gggattcttggtgtacttcgtcttaacctgggtgactccatgctgcacagtcttgtggtt
gtgacgggatgcagttctgctggcaaggtgcaggattcagaggtttttagggtcacacag
acagattttatatcactgaggaacgatccaggggatgaggacagaatctcagaggtccgt
aagctcctaaactcaggtcacttctactttgcctggtcttccactggcgtcagcctggac
ttgagtctcaacgcacatcgcaggattctagaagataccacagataaccgcttcttttgg
aaccagtctttgcatctgcaccttaaacactatggagttaattgtgaggactggctgctg
aggctgatgtgtggcagcgtggagatcaggaccatttatgcggggcataaacaagccaag
gcctgcatcttctctcgcctcagctcagagcgagctggcactcggtttaatgttcgagga
gcaaatgatgacgggcaagtggccaactttgtggaaacggaacaggttattttccttgaa
gacagagtatcatccttcatacagatccgtgggtccattccacttttctgggaacaacca
ggaatacaggttggttctcatcgtgtgaaactctcaaggggatttgaagctaacgccccg
gcttttgaaagacactttgctgccctgcgtaggttgtatggaaaacaggtgatcattaac
cttctgggagggaaggaaggggagcacatgctcagcaaggcttttcagagtcacctgaag
gcgtcggaacatgcagcctctgtgaaaatgatcaactttgactaccatcaaaatgtgagg
ggtggcaaagcagacaaactccacagcgttttgaagcctctgctcaataagttcattgag
gactgtggcttcttttattactctggggaaactggcattgtaaggactcagggaggaacc
atgaggaccaactgcctggactgtttggatagaactaacagtgttcaagccttttttggc
ctggagatgttgaccaaacagttagaacaaatgggcctgacagagaaaccccagctggtg
gccaggttccaggaggttttcagaaccatgtggtctgtgaacggggactccatcagtaag
atctatgcaggcactggtgctctggatgggaaagccaaggcgggaaagcttaaagatggc
gcgcgctccgtcacacggaccatccaaaacaacttctttgacacctccaagcaggaagcc
atcgatatcttaagactgggctccacactgaacagtgatctggcagacaaagctcgtgct
ttgctcaccacttccagtctttatgtcactgagcctgtcttacaatcagcctctccaaga
gtgttgctgggaatgtgtcaaagctaccacaaatacacgcggccgaagcagatccgcgtg
tgcgtcggcacctggaatgtgaacgggggcaaacagttccgcagcatagctttccgcaac
caaacactcaacgactggctcttggatgctccgatgaaggccgggcatcctgagttccag
gacagcaaagcaaaccccatagatatctttgccatcggatttgaggaaatggttgaactg
aatgctgggaacattgtcagtgcaagcaccactaaccaaaaactctgggcagcagagctt
caaaaaaacatttccagggaccacaagtatgtgctgctggcatcagagcagcttgtagga
gtgtgtctgtttgttttcatccgccctcagcacgctccgttcatcagagacgtagctgta
gacacagtgaaaactggaatgggcggggccacaggtaacaaaggaggcgtggccatccgt
ctgctgttccacaccaccagcatctgctttgtgtgctcccactttgccgccggccaatcc
caggtcaaagagaggaatgatgactacaacgagatcacgcgcagactcagtttccccatg
ggtcgtctgctctactcacatgattacgtgttctggtgtggagacttcaactaccgaatc
aacctgcccaacgaggaagtgaaggagctcatccgacagcagaattgggatgctttgaca
gctggggatcagctggtggaacagaaaaatgccggagcgatcttcagggggttcattgag
ggaaaattggattttgcccccacctacaaatacgacctcttctcagaagattatgacacc
agtgagaagtgccgcacgccggcgtggacggaccgcatcctttggaagaggagaaagtgg
aacttcaacaaaacggcagaggagatgaatgttgttggagcgtcatctactgctgcggag
aatgaggaggatccggaatatgcatggagccctggtgttttacagtactatgggagagct
gagctaaagacctcagaccacaggcctgttgtggcagtaatagatgtggatatcctggaa
gtggacccagaatctcggcaccaggtctacaaagatgtcattggcaagcaggggcctcca
gatggcaccatcctggtgtcgctctgctcctctgggcccgatgattacttcagcgatgac
ctaattgatgagctactggataaattttccagttttggagatgtcatcctcatcagattc
gttgaggaaaagatgtgggtgactttcctggaaggttattctgctttggcagctctttca
ctgagtgcttccactgttcttgggaaggtggttgacatccgcctcagaagcccgggctgg
atcaagagtctggaggaggagatgagtgtggaaaggatcttcggaagcattcccacatca
gccagctccactctgctcgccgaagacgccgacgtggatgaggatgaatttgacatggag
ggtgaagtggatgaggaagtggaggagattcttccacagcacctgcagcccggagccggt
tctggtcccggttcctctcccctcccctccccccgcagcagtccctgtccctcccccacc
cacggtgaacccaccgcacccagcaggcccagccgttcccagcaaccctcccgaccatca
caagaaatggaaataagtcctttgtctctgagattggagtttccaggaccccctgttgac
tttcagcctggagcgcccccatctggaggcctggagcccaagcgcccaccaccccctcga
cccactccccctcctgctagacccgctccacctcagcggcccccaccaccatcaggagca
aaaagccccgctcttcctcgaccagaccctcgtgcaggtcgtggacaagctgctgctgga
gctccaggacctggaggagctcccagacctaatattccccctagagccggagtgattagc
atgccccctcagtctcgccccccgcctcccgctcaccccggggcgccgcggcccatcccg
gaggtgcatccaggcgcccctcggccggttccagacacccatcctggagccccacgccct
gttcccagcgcccatgccaaaccaccagaccttcctttgggtcctcctccatcaggacct
cctcctgcagcccccttcgctttaaaaccccagactcagtcccccccacagcctcagccg
ccctcatcttctgctccgtcacaactcccaccacccatgcagcccacacttccagctcct
ctgcagccacagcaggccggagctcctccagcagcagcagcagcagctccctccggcacc
cccgctgggcctcagcagggcctggcctctcccaaacctccgccccgttcccgctcctct
cacgctctgccacctgatgctgccaaacccgagagcgccccaactgcacagacaaacgga
ttgaatggaatccaaagagaagcacaatggaggcccaacccttttgacaagctcgcatta
gacttccactccgccccttcctggcacagcacccagtcactgagcagaggctcctccctc
cacgctcccccctccgtccctccatcggtgttttcctccacaacgctgccgtcctccttc
tcccaccagtcctctgctctgttggacctccaagctttggagtcctcctcctcttcctcg
ctctccaccccgtcgccgtttgcctcttccttactcccgccccctccggtgccgtcccgc
agcaggtcgcaggagatgctgcgctcctccccgaacgctttcgtgactgaccccctgccg
gcccgacccagcagcaccaatcctttcaccggaccgctgactcagcagcagcagcaccgt
cgcccgctcacccccgacttcaacttccaacttcaagcaagccttcagaaaagctcgtct
gctgtcgctccgctgctcgtcccgacccccgcaccaaccgcccagctccacaggaccacg
tccctgtttggaccaccatcgaatcaaagtgcccggcttcccgaatcagcatctgcccct
gttttgcctctggctcccccttcgtcccttccacctacctttgcccttcagccccagcca
gctcctttaggaccgatgcccaaaaggcagtgggtgacttttgacgacgaattggatttt
tcctcccgagctcaaacacaaaaccccgtcttcccatctacttccatcgggtcccaaccc
tctcgctccgtgtttgcctcagaacccgactggttatcctctgcctccctgacatcccaa
aagcagctccaaccttctagttctgtttttgtctcagaacccgactggttatcctctgcc
cctctggtaccaaaacagcagaaccaaccgcctcgctccgtctttgactcagaacccgag
tggttatcctccgcccccgcctccctggtgtctaaacagcagaaccaaccttcccgttct
gccaccgtctccgagcctgactggctatcttcttcctccaactag
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integrated database retrieval system
