Oryzias melastigma (Indian medaka): 112139814
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Entry
112139814 CDS
T07439
Symbol
psmc2
Name
(RefSeq) 26S proteasome regulatory subunit 7
KO
K03061
26S proteasome regulatory subunit T1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
112139814 (psmc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
oml03051
]
112139814 (psmc2)
Proteasome [BR:
oml03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
112139814 (psmc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
OB_PRS7
AAA_lid_3
AAA_22
AAA_2
AAA_5
AAA_16
DUF815
nSTAND3
AAA_14
RuvB_N
AAA_28
Prot_ATP_ID_OB_C
AAA_7
AAA_33
AAA_18
TIP49
RNA_helicase
Mg_chelatase
Sigma54_activ_2
IstB_IS21
AAA_24
Motif
Other DBs
NCBI-GeneID:
112139814
NCBI-ProteinID:
XP_024118416
Ensembl:
ENSOMEG00000013105
LinkDB
All DBs
Position
LG23:complement(4062107..4068113)
Genome browser
AA seq
433 aa
AA seq
DB search
MPDYLGEDQRKTKEEEKDDAPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKIN
ELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK
FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGC
KEQIEKLREVVETPLLHPERFVSLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV
IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML
ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHAR
SMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSY
AKFSATPRYMTYN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccggattatttgggagaagatcaacggaagaccaaggaagaagaaaaagatgacgca
cccattcgagctttggatgaaggcgacatcgccctgctcaaaacatatggtcaaagcaca
tactccagacagatcaaacaggtggaggatgacatccagcagcttcttaagaagatcaac
gagctcacaggcatcaaagagtcagacacaggcttggctccaccagcactgtgggatctg
gctgctgacaaacagactctgcagagtgaacagcctttacaagtggcgagatgcactaag
atcatcaacgcagactccgaagacccgaaatatatcatcaacgtcaagcagttcgctaag
tttgtggtggatttgagtgaccaggtggctccaactgacattgaggaaggcatgagagtt
ggggttgacaggaacaagtatcagatccacattcctctacctcctaagattgaccccact
gtaactatgatgcaggtggaagagaagcctgatgtgacctacagtgatgttggtggctgc
aaagagcagattgagaagctgagagaagtggttgaaactcctctgctccatcctgaaagg
tttgtcagcctgggcatcgagcctcctaaaggtgtgcttctgttcgggccacccggcacg
gggaagaccctgtgtgcccgagctgtggccaacagaaccgacgcctgcttcattcgagtc
atcggatctgagttggttcaaaaatatgtgggagagggagccaggatggttcgggagcta
tttgagatggcaagaaccaaaaaagcctgcctgatcttttttgatgaaatcgatgccatt
ggaggcgctcgtttcgatgacggagctgggggggacaatgaggtccagaggaccatgctt
gagctcatcaaccagctggatggtttcgacccgcgaggcaacatcaaagtgctcatggcc
accaacaggccggacactttggacccggctctgatgagaccgggccgtctggataggaag
attgagttcagccttcctgacctggagggtcgcacacatatttttaagatccacgcacgc
tccatgagtgtggagagagacatccgcttcgagctcctggcccgtctgtgccccaacagc
accggtgctgagatccgcagcgtgtgcacggaggccggcatgtttgccatcagagctcgc
aggaagatcgccacggagaaggacttcctggaggctgtaaacaaggtcatcaaatcctac
gcaaagttcagcgccaccccccgatacatgacatacaactga
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integrated database retrieval system
