KEGG   Oryzias melastigma (Indian medaka): 112139888
Entry
112139888         CDS       T07439                                 
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112139888 (exosc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oml03019]
    112139888 (exosc8)
Messenger RNA biogenesis [BR:oml03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     112139888 (exosc8)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 112139888
NCBI-ProteinID: XP_024118499
Ensembl: ENSOMEG00000013266
UniProt: A0A3B3DJG7
LinkDB
Position
LG14:complement(16810404..16812712)
AA seq 277 aa
MAAGFKIAEPLEYHMSFLKENCRPDGRELSEFRTTTLNIGSISTADGSALVKLGSTTIIC
GIKAELTNPTVEAPGKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSEMIK
PEDLCIDRGKLCWVLYCDIMCLDYDGNILDACIIALLAALKNTRLPKVTINKVTCKPEVD
SKERHKLPVHKHPVSTSFSIIENSILIVDPTADEESLSTARLSVVTDEDDRLCSLHKPGG
TSLSAEKLQTCINRATARQREIQKLMEKVLKSVKAAQ
NT seq 834 nt   +upstreamnt  +downstreamnt
atggcggccggatttaagatcgcagagcctctggaatatcatatgagctttctgaaagaa
aactgtcgacctgatggacgggagctgtctgaattcagaaccacaacattaaacataggg
tccatatccacagcagacggatctgctctggtgaagctggggagcacaacaatcatctgt
ggcatcaaagcggaactgacaaaccctacagtggaagctcctggtaaaggatacattgtg
cccaatgtggacctgccccctctctgctcctctcgatttcggcctggccccccaggagaa
caggcccaagctgccagtcagtttattgcggacgtgattgaaagctctgaaatgatcaaa
ccagaggacttgtgcatcgacagaggaaagctttgctgggtgctgtactgtgacataatg
tgtctggattatgatggaaacattctagacgcgtgcatcattgctctgctggctgcactc
aagaacactcgtcttccaaaggtcaccatcaataaagtgacatgcaaaccagaagtagat
tcaaaagagcgacacaagctgccagttcacaaacatccagtcagcacctctttttctatc
atcgagaactccatcctgattgtagatcccacagctgatgaggagagtctgtccacagcg
cggctcagcgtggtgacagatgaagacgatcgactctgctctctacacaaaccaggtggg
acgtccctgtcagcagaaaagctgcaaacttgcatcaaccgagcgacagcacgacaaaga
gagatccagaaacttatggagaaggttctaaaaagcgtaaaggcagcacaataa

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