Oryzias melastigma (Indian medaka): 112139936
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Entry
112139936 CDS
T07439
Symbol
pum3
Name
(RefSeq) pumilio homolog 3 isoform X2
KO
K14844
pumilio homology domain family member 6
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112139936 (pum3)
03009 Ribosome biogenesis [BR:
oml03009
]
112139936 (pum3)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112139936 (pum3)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
112139936 (pum3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
Bmt2
Motif
Other DBs
NCBI-GeneID:
112139936
NCBI-ProteinID:
XP_024118571
Ensembl:
ENSOMEG00000009427
LinkDB
All DBs
Position
LG18:complement(3926648..3948896)
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AA seq
644 aa
AA seq
DB search
MESKIKKAFSPKGVKKLAQRGKESIGSKLGGKPGGKKTFKPLKNAEKQNRAKDRGNKQHK
PAFSRGGGAQQGKRKLSAFKNKKERDEGPAAKRVKKGELLSEEELQKNRLQRRKELKRSR
QQAARKEMFEVINQSKQVWEDLRRKKCDEELKKKLMKQLHDLIRGNTKQMAFAHDSVRIL
QCFLQFGSHKQRQELFEDLKDDIPSLCKSNYGRHVVKKLLMYGNKELVAAVMQTFKGHVR
QMLRHSAASAVIEYAYNDKALLAQRLMLSDELYGNTYALCKSSEHNTIEKVVKGNPDKVD
SIMDEMKQILLPMASKEQVIKHSLVHKAFLDFFLFAPDKQKSEMIESIRESVVYMAHTHD
GARVAMHCLWHGTAKDRKVIIKTMKTYMVKFATGEFGHLVLLAIFDCVDDTKLIRQAVLS
EILSSLKEVISNKHGKKVLLYLLSHRNPAHLLPETIKVLEQGDRNVHSKKDPEIRRRELL
EALSPPILEYLCENAADMVKDKATGVIISDILGSACGDLRPAMTVVAQLANQELVPGGVA
GELHMAEHPAGHLVLKWLIQHDGALAQSGREERFGRILVDTVGTEQLKSWARVNRGAIVL
CSLLNSCDPSVAAEVKAALQSITSQLRSTSSNQGVQILLQNLDK
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggaatccaaaatcaaaaaggccttttctcctaaaggtgtaaaaaagcttgcccagaga
ggaaaggaatctatagggagcaaacttggaggaaaaccaggtggtaaaaagacgttcaaa
cccctcaaaaacgcagagaagcaaaaccgagctaaagatcggggaaacaagcagcacaag
ccggccttctccagaggcggtggggcgcagcaggggaagaggaaactgtctgcttttaaa
aacaagaaagagagagatgaaggcccagcagccaaaagagtcaagaaaggggagctgctg
tcagaggaggagctgcagaagaacaggctgcagaggaggaaggagctgaaaaggagcagg
cagcaagcagccaggaaggaaatgtttgaggtcatcaatcagtccaaacaagtgtgggaa
gacctgaggaggaaaaaatgtgatgaggagctgaagaagaagctgatgaagcagctccac
gatctgatccgcgggaacaccaaacagatggcttttgctcacgactcggttcggatcctg
cagtgcttccttcagtttggcagccacaagcagaggcaggagctatttgaagacctgaaa
gatgacatcccttctctgtgtaagtcaaactatggccgacatgtggtcaagaagctgctc
atgtatgggaacaaggagctggttgcagctgtgatgcaaacttttaagggtcacgtgcgg
cagatgcttcgacactcagccgcctctgctgtgatcgagtacgcttacaacgacaaagcc
ctcctggcgcagagactcatgctctccgacgagttgtacgggaacacctacgctctctgc
aagtcatcagagcacaacaccatcgagaaggtggtgaagggaaaccctgacaaagtggac
agcatcatggatgagatgaagcagatcctcctgcccatggccagcaaggagcaggtgatc
aaacattctctggtgcacaaagccttcctggattttttcctgtttgctcctgacaagcag
aaatcagagatgatcgagtccatcagagagtctgtggtctacatggctcatacccacgac
ggcgctcgagtggccatgcactgtctgtggcacggcacggccaaggacaggaaagtcatc
atcaaaaccatgaagacctacatggtgaagtttgccacaggggagtttggtcacctggtt
cttctggccatctttgactgtgtggacgacaccaagctgatcagacaagctgttctctct
gaaatcctgtcatcactgaaggaagtcatcagtaacaaacacgggaaaaaggtgctgctg
tacctgctcagccacagaaaccccgcccacctgctgcctgaaaccatcaaggtgttggag
caaggagacaggaacgtgcacagtaaaaaagatccagagatacgaagaagggagctgctg
gaagccctgtcccctcccatcctggaatacctgtgtgaaaacgcagcagacatggtgaag
gacaaggccaccggagtcatcatcagtgacatcctgggctcagcctgcggggacctgcgg
cccgccatgacggtagttgctcagctagccaatcaggagctggtgccgggaggcgtggcc
ggagagctccacatggcggagcatcccgctggtcacctggtgctgaagtggctcatccag
catgacggtgcgctggcccagtctggcagagaagagcgctttggcagaatcctggtggac
acggttggaacggaacagctgaagagctgggccagagtgaaccgaggagccattgtgctc
tgcagcctgctgaacagctgtgacccgtctgtggctgcagaggtgaaggcggcgctgcag
tccatcacatcccagctgcgcagcacctccagcaaccagggagtgcagatcctgctgcag
aacctggacaagtag
DBGET
integrated database retrieval system
