Oryzias melastigma (Indian medaka): 112139961
Help
Entry
112139961 CDS
T07439
Symbol
rbm12
Name
(RefSeq) RNA-binding protein 12
KO
K24526
RNA-binding protein 12
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112139961 (rbm12)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112139961 (rbm12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
112139961
NCBI-ProteinID:
XP_036071182
Ensembl:
ENSOMEG00000008238
UniProt:
A0A3B3D8F3
LinkDB
All DBs
Position
LG2:2398156..2409962
Genome browser
AA seq
900 aa
AA seq
DB search
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGSIKGSKVSLLLSSKTEMQNMIELSRRRFEAGAGAVDMAPPAAVNTNRQAGPASLPPVQ
SGVGGRSSSHGNQGFTPASATTAGPSQEPQSIKVATSMAGAMAGSVPSFPNSYSSAPTMT
TSLPSLNAGLPPIPPLPNMPSMPPMSTLSTITVPPPVSSLPPVPTVSPLSQGPPVPPMSH
IPQMTSLPPFNPTMPPPATLGSGLPLGAPNPMLFNPLSSLASLGLQAQMKAAATGMASPD
DLFVLLQNLPFSCSEMEVRDFFRGLGVEGVRLQRDGHGRPNGRAAVKFFSPQDSFEALKR
GGGMMGQRFIEITPGSERQWVGLNNSGTSHVSYSSSKSNNAIELQGHQHRGGSTPGGRDH
RDRSRSPHRQEFCVYLKGLPYEADKRQIKEFFKNVAVLEDSIFIAQGPNGRATGEGFLEF
KSEEDYKIALGAHMQYMGSRFIQVHPISRKGMHEKIEAIRKREAAHGDGKNQDGMKTPRN
CAHITNIPYNISKKDVRSFLEGVGIYEESLKVLTDSQGNGLGQAIFQLRAEEDARKVERL
HRQKLNGRDAFVHLVTFEQMKEIERNPPPQNKRGQRNQHQQNQNQNQSQAQQVQPSPQQP
QMNPFAGIAGEEFSFLRNTMGSLNNPPFVAPFTAPGNGLTGPPPLPPLAAGLGDVSLGMA
PPLVAGIPGAPMLEPPGIRPGAAAGAPFVQDGLRGLLPFENANRKGGGGGQNRGGAASSN
QGRPVGGAVGGQQVFTPGTEGIRNQPNPGPPTNPTTQRGAGGPTVVKLQNMPFTVTVDEI
MDFFYGYQVLPGSVCLQFSDKGLPTGEAMVAFQNHEEASAAVLDLNDRPIGSRKVKISLG
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagtcatccggctgcagggtctgcccatagtggctggaaccatggacatcaga
cacttcttctctggcctcaccattcccgatgggggagtgcacatcgtggggggtgaacat
ggcgaagccttcatcgtcttcgccacagatgaggatgctcgcctgggaatgatgcgaaca
ggcggctctattaagggctcaaaggtctccttgttgttgagtagcaaaaccgaaatgcaa
aacatgatcgagctcagccgccgccggtttgaggccggggcgggcgccgtggacatggct
ccacctgcagccgtaaacacaaacagacaagctgggcctgcttccctgcctccagtgcag
tctggagttgggggacgatccagtagccatggaaaccagggtttcactccagcctcagca
acaaccgccggcccgtctcaagaaccgcagagcatcaaggtggcgaccagcatggccggc
gccatggccggctccgtgcccagcttccccaacagctacagctcagcccccactatgacc
acgtctctgccatcgctcaatgctggactgccacccattcctcccctccccaacatgccc
tccatgccccccatgtccacactgtcaaccatcacagtccctcctcctgtgtcctccctc
cctcctgtcccgaccgtctccccgttatcccagggacctcctgtgccgccaatgtctcac
attcctcaaatgacctctctcccgccctttaaccccaccatgcccccccctgcaacactg
ggctctggtctccccctgggagcccccaaccccatgctgttcaaccccctctcctctctg
gcctccttgggccttcaggcccaaatgaaggccgccgccacaggcatggccagtcctgac
gacctgttcgttcttctgcagaatctcccgttttcatgctccgaaatggaagtcagagac
ttctttcggggcctgggggtggagggggtgcgcctgcagagggacgggcatggccgaccc
aacggtcgggctgcagtcaagttcttctctcctcaggacagttttgaagctctgaagcga
gggggtgggatgatgggccaaaggtttattgagatcacccccggctcggagcgtcagtgg
gtgggcctaaacaacagtggaacaagtcatgtctcttacagtagcagtaaatctaacaat
gcaattgagctccagggtcaccagcacagggggggaagcacccctggaggtcgagatcac
cgagacagatcccgatctcctcatagacaggagttctgcgtctacctgaaaggccttccc
tacgaggccgacaaaagacagatcaaagagttctttaagaacgtggctgtgctcgaagac
agcatcttcatcgcccagggtccaaacggtcgcgccacaggcgagggcttccttgagttc
aagtccgaggaggactacaagattgctttgggggcccacatgcagtacatgggctcccga
ttcattcaggttcacccgatcagccgtaagggaatgcacgagaagatcgaggccatccgc
aagcgtgaggcagcgcacggtgacggcaagaaccaggatggaatgaaaactccccgcaac
tgtgcccacatcaccaacattccctacaacatctccaagaaggacgttcgcagtttcttg
gagggcgtgggcatctatgaggagtctctgaaggttctaacggacagccagggcaatggt
ttgggccaggccatcttccagctgcgagcggaggaggatgctcgcaaagtggaaaggctg
caccggcaaaaactcaatggccgcgatgccttcgttcacctcgtcacctttgagcaaatg
aaggaaattgaaagaaaccccccgcctcaaaataagaggggtcaacgtaaccaacaccag
cagaaccaaaaccagaaccagagccaggcccagcaggttcagcccagtccacagcagccg
cagatgaaccccttcgctggcattgccggtgaggagttcagcttcctcagaaacaccatg
gggagcctgaacaaccccccctttgtggctccattcacggctcctgggaacggactaaca
ggccctcctcccctaccccccctggctgcaggcctgggggatgtcagcctgggaatggct
cctcctctggttgcaggaattcctggagcaccaatgttggagcctcctggcatccggccc
ggagcggcagcaggagctccgtttgttcaagacgggctgagagggttgttgccgtttgaa
aatgcaaacagaaaaggaggtggaggaggccagaaccgcgggggagcagccagcagcaac
cagggacgcccagtgggaggagctgttggcgggcagcaggttttcaccccgggaaccgaa
ggaatacggaaccagccgaaccctggacctcccaccaaccccaccacccaacggggcgct
ggcgggccaaccgttgtcaaactgcagaacatgccattcaccgtcactgtggacgagatc
atggacttcttctacggctaccaggtgctgccgggttcagtctgcttacagttcagtgac
aaaggcctgcccaccggcgaggccatggtggctttccagaaccacgaggaggcctctgct
gcggttctggacctcaatgatagacccatcggatcacgcaaagtcaagataagcctgggt
taa
DBGET
integrated database retrieval system