Oryzias melastigma (Indian medaka): 112139973
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Entry
112139973 CDS
T07439
Name
(RefSeq) protein transport protein Sec61 subunit alpha-like 1
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03060
Protein export
oml04141
Protein processing in endoplasmic reticulum
oml04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
112139973
04141 Protein processing in endoplasmic reticulum
112139973
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112139973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112139973
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
oml02044
]
112139973
Membrane trafficking [BR:
oml04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
112139973
Secretion system [BR:
oml02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
112139973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
DUF2975
Motif
Other DBs
NCBI-GeneID:
112139973
NCBI-ProteinID:
XP_024118626
Ensembl:
ENSOMEG00000007488
LinkDB
All DBs
Position
LG5:22575829..22584073
Genome browser
AA seq
476 aa
AA seq
DB search
MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
MIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS
LFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP
NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN
LYVISQMLSTRFSGNFLVNLLGTWSDTSSGGPARAYPVGGLCYYLSPPESFGSVLDDPVH
AIIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTA
AAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggggattaaatttttggaagttatcaagcccttctgtgcagtcctgccagaaatacag
aaaccagaaagaaagatccagtttagagaaaaagtattatggactgccatcactctcttc
atctttttggtgtgctgccagattcctctttttggcataatgtcatcagactcggccgat
cctttctactggatgagagtaatattggcttcaaacagaggtactctaatggagctgggt
atatcgcccatcgtcacctcgggcctcatcatgcagctgctggctggtgccaaaatcatt
gaggtgggagataccccaaaggacagagcactctttaacggagctcagaaattgtttgga
atgatcatcaccatcggacaggccattgtttacgtgatgactgggatgtacggagaccct
tcagagatgggagctgggatctgcctgctcatcatcattcagctctttgtggcaggtctg
atcgtcctgctgctggacgagctccttcagaagggctacggtctcggttctggtatctct
ctcttcattgccaccaacatctgtgagaccattgtttggaaggccttcagtcccacgacg
gtcaacaccgggagaggcacggagtttgagggcgccatcatcgctctcttccacctgctg
gcgactcgcacagacaaagtccgcgccttgagagaagccttctacaggcagaacctgccc
aacctgatgaacctcatcgccaccgtctttgtgttcgccgtggtcatatatttccagggc
ttcagagtggacctgccaatcaaatctgctcgctatcgcggtcaatacaacacctacccc
atcaagctgttctacacctccaacatccccatcatcctgcagtctgctctggtgtccaac
ctctacgtgatctctcagatgctgtcgacgcgcttcagcggcaacttcttggtgaacctc
ttaggaacgtggtctgacacctccagtggaggacctgctcgagcctacccagtgggcggt
ctgtgttactacctctctcctccggagtcgtttggttctgttctggacgacccggttcat
gctatcatttacatcgtcttcatgcttggctcctgcgccttcttctccaaaacctggatc
gaggtttctggatcttctgccaaagatgtggcgaagcagctgaaggagcagcagatggtg
atgagaggacacagagagacctccatggtgcacgagctcaacaggtatatccccacagct
gctgcgttcggaggcctctgtataggcgggctgtctgtcatggcagactttctcggtgcc
atcggttctgggacgggaatcctcttggctgttaccatcatctaccagtactttgagatc
tttgtcaaagagcaaagtgaagttggcagtatgggagcacttctcttctga
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