Oryzias melastigma (Indian medaka): 112139977
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Entry
112139977 CDS
T07439
Name
(RefSeq) matrilin-4
KO
K19467
matrilin
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112139977
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
112139977
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Gene cluster
GFIT
Motif
Pfam:
VWA
FXa_inhibition
cEGF
EGF_CA
VWA_2
Matrilin_ccoil
EGF
EGF_3
hEGF
IMS
Motif
Other DBs
NCBI-GeneID:
112139977
NCBI-ProteinID:
XP_024118631
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Position
LG2:complement(2155670..2177973)
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AA seq
704 aa
AA seq
DB search
MRQLRASRVFVLLSLVVLATARPRAGPEQKCKPGPLDLIFLIDSSRSVRPHEFETMRKLM
IDILNSLEIGLDSTRVGVVQYSSQVRSEFSLKTHADLDSVVAGIRRIIPLAQGTMTGLAI
RYMMNEAFTVEQGDRPKVPNVAVIVTDGRPQDRVAEVAAEARQRGIEIFAVGVARADMTS
LRAMASPPFEDHVFLEESFDLIHQFGLQFQDAFCGLDLCKEMDHGCQHVCENSPGSFHCL
CHEGYTLNQDGKTCTAIDLCAEGKHDCEQVCISSPGNFSCDCSRGYQLQEDGRSCSMIEY
CSFGNDSCDHNCVNVLNGFYCSCKEGHRLQDDGKTCQAIDLCAEGKHDCQQVCMNMGPAI
FTCDCNEGYTLNEDERSCTPIDLCAEGKHDCQQVCISAPGVFTCDCRKGFKLNDDKKTCT
NMEMCSTVQHGCEFQCVNTPGSYYCVCPEGQLLQDDGKSCGACTSANIDLVLLIDGSKSV
RPQNFELVKKFVNQVVDSLDVSTHGTRVGLVQYSSRVRTEFPLNMYHTAEDIKAAVMKVE
YMEKGTMTGLALKHMLENSFSEAEGARPATRNIPRIGLVFTDGRSQDDISEYAKKAKEAG
ITMYAVGVGKAVEDELREIASEPVEKHFYYTTDFNAISTIADNLKLNVCPEESQGEVEVK
DPCACENLVDFQQNTVSSLEQLTQKLAAMTSRLVELENQLLSRK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgagacagctccgagcatcaagggtctttgttctgctgagcctggtggtcctcgccaca
gccagaccgagagcaggtccagaacagaagtgtaagcccggcccgctggatctgatcttc
ctcatcgacagctcccgcagcgttcggcctcatgagttcgagaccatgagaaagctcatg
attgacatcctcaacagcctggagatcggactggacagcaccagagtgggagtggtgcag
tattccagccaggtccgcagcgagttctcgctgaagacccacgcagacctggacagcgtg
gtggcgggcatcaggaggatcatccccctggctcagggcaccatgacaggactggccatc
agatacatgatgaacgaggcgttcacggtggagcagggcgaccggccaaaggtcccaaac
gtggctgtgatcgtgacggacgggcgtcctcaggaccgcgtggccgaggtggccgctgaa
gccagacagagaggcatcgagatcttcgctgtgggagtggccagagctgatatgacatcc
ctgagggccatggcctccccgccctttgaagatcacgtcttcctggaggagagctttgac
ctcatccaccagtttggacttcagttccaggatgcgttttgtggtctggatctgtgtaag
gagatggaccacggctgccagcacgtctgcgagaactccccggggtccttccactgcctc
tgccacgagggctacactctgaaccaggacggcaagacctgcacagccatcgacctctgc
gctgagggcaaacatgactgtgagcaggtctgcatcagctcccccggaaacttcagctgc
gactgcagcagaggataccagctgcaggaggacgggaggagctgctcaatgattgagtac
tgctcattcgggaacgacagctgcgatcacaactgtgtgaatgtgctcaacggcttttac
tgctcctgtaaggagggacaccggctgcaggacgacgggaagacctgccaggccattgac
ctgtgcgccgaggggaaacacgactgccaacaagtctgcatgaacatgggcccggccatc
ttcacctgcgactgcaacgagggatacacgctcaacgaggacgagaggagctgcactccc
atcgacctgtgtgctgaggggaagcatgactgccagcaggtctgcatcagcgcgcctgga
gtgttcacctgtgactgccgcaaaggcttcaaactcaacgacgacaagaagacctgcaca
aacatggagatgtgcagcacggttcagcacggctgtgagtttcagtgcgtgaacactcct
ggatcttattactgcgtctgtcctgaggggcagctgctgcaggacgacggcaagagctgt
ggtgcctgcacgtccgccaacatcgacctggtgcttctgatcgacggctccaaaagcgtt
cgtcctcaaaactttgagctggttaaaaagtttgtcaaccaggttgtggactctctggat
gtctccactcatggtaccagagttggtctggtccagtactccagtcgggtcagaacagag
ttccctctcaacatgtaccacactgctgaggatatcaaagctgccgtcatgaaggtggag
tacatggagaaagggacgatgacgggtctggccctgaagcacatgttggagaacagcttc
tcagaggcagaaggcgctcgtccggccactcgcaacattcccagaatcggactggtcttc
acagacggacggtcccaggacgacatcagcgagtacgccaagaaggccaaggaagcagga
atcaccatgtacgccgtgggcgtcggaaaagctgtggaagacgagctccgtgagatcgcc
tccgagccggtggagaagcacttctactacaccactgacttcaacgccatcagcaccatc
gcagacaacctgaagctgaatgtgtgtccagaggagagtcagggggaggtggaggtgaag
gatccatgcgcctgcgagaacctggtggacttccagcagaacaccgtaagcagcctggag
cagctgacacagaaactggccgccatgacctcccgcctggtggaactggagaaccagctt
ctctccaggaagtga
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