Oryzias melastigma (Indian medaka): 112139996
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Entry
112139996 CDS
T07439
Symbol
unm_sa1614
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112139996 (unm_sa1614)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112139996 (unm_sa1614)
Membrane trafficking [BR:
oml04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
112139996 (unm_sa1614)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
SH3_1
SH3_9
PH
Ank_5
Ank
SH3_2
Ank_4
Ank_3
Motif
Other DBs
NCBI-GeneID:
112139996
NCBI-ProteinID:
XP_024118651
LinkDB
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Position
LG5:22175084..22195026
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AA seq
1042 aa
AA seq
DB search
MTRSAPALQVPSFFSPPLFGVPLRFGSRTSAFAERSTMPECMSVSEFVEEVQEDWSSPTT
SSFTSKMTSCRNTVYLLEEVLDSDRLVLQKMKKAAKSKFTSGQEHVSHLEQYINSMEKLS
VNCHSNGETEVGSAFCRLADFSKEFLSPMKNLLKSMLHNINFFLDSLVKGDLRDIKGDLK
KPFERAWRDYESRFKQVEKEKRELARQYGMVRSEVSGGEIAEELEKERRSFQLSMCEYLI
KVNEIKTKRGVDLLQNLIKHYHCHNNFLQECVSTTHRLKQYMEELNGVLSTVKQRQDEEK
KQLCALRDQLRPVVHTEQESVQIQTYSMHQLLGDKQYGTERSGFLYKKSDGLRKMWQKRK
CSVHNCYLTIAHATPNKPPTRLNLLTCQVRPSVEDKKCFDLISHNRTYHFLAEDEAECVA
WISVLSNSKQEALSMALDGCSRAGEEESSVEDLTRAITDDIRRMPGNSSCCDCGAPDPGW
LSTNLGILTCIECSGIHREMGVHVSRIQSLSLDSLGTSDLLLARNVGNSGFNEILEANLL
SPSLKPSQHSQMGERKDFILSKYQDVHFVRRSQSSAAALRLGLQEATKSCDIYSLIQLHA
QRADLSQPLNTHIQEKGETALHLAVLLADRTSLHILDFLAQNCPNVDAQTSAGNTALHYS
CLHNKSDCVKLLLRAHANTHTKNHLGETALDVSRRLKHTACETLLDQAQSNQFDHHVHVE
YEWRLRHEDLFDSDEDFEEKNGPVKKERCFSSSSSSFTPSLSFSSRPFIFSQSSLSSSSS
VAPLSSGAPGGGLFSVGRRLAMAMELHSHPSSSAPSPPPPPPCSPAPQLPPRVKAPNVPP
PPPPAAGANGGREGDEEEGEVFLPMTTNRGTTPPAIAVRHKRTCSESNKHDYGAPSSPRI
FSGPDSSFSPASPRSLKAERAERGIRRAESDSASSSYVHLVTKAPPNGTPAHQCPQSFDG
DVRGPAPLPLPRRSLRPRGAAGRRAQALYDCQADHHDELSFTEGQVLVVVGQEDSDWWLG
YLEEKPDQTGLFPSSFVQLLSD
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgctctgcgcctgcgctccaggtcccttcattcttcagcccccctctctttggg
gtcccgctccgcttcgggtctcgaacctccgcctttgccgagaggagcaccatgccggag
tgcatgtcggtgtctgagttcgtggaggaggttcaggaggactggagctcccctaccacc
tcctccttcacctccaagatgaccagctgcaggaacaccgtctacctgctggaggaggtt
ctggacagcgaccggttggtgttgcaaaagatgaagaaagctgcaaaatccaagttcacg
tcaggacaagagcacgtgtctcacctggagcagtacatcaactccatggagaaactctcc
gtcaactgtcattcaaatggggagacggaggttggctccgcattctgccgcctggcagat
ttctccaaagagttcctctctcccatgaagaacctgttgaagagcatgctccataacatc
aacttcttcctggactctctggttaaaggagacctgcgtgacatcaagggggacctgaag
aagccgtttgaaagagcatggagggattacgagagcagattcaaacaggtggagaaggag
aagcgggagttggcccgacagtacgggatggtgaggagtgaagtgagtggaggggaaatc
gcagaggagctggaaaaggaaagacgctccttccagctgtccatgtgtgagtacctcatc
aaggtaaatgagatcaagacaaagagaggagtggacctcctgcagaacctcatcaaacac
taccactgtcacaacaacttcctgcaggaatgcgtctccaccacccacaggttgaagcag
tacatggaggagctgaacggagtcctgagcacggtgaagcagcggcaggatgaagagaag
aagcagctgtgtgctctcagagaccagctgcgacccgtggtccacacggagcaggagtct
gtgcagatccagacctacagcatgcatcagctgctgggagacaaacagtacggaacagag
aggtccggcttcctctacaagaagagtgatggtctcaggaaaatgtggcagaagagaaag
tgctcggttcataactgttacctgaccatcgcccatgctactccgaacaaacctccaacc
agactcaacctgctcacctgtcaggtcaggcccagcgtggaggacaagaaatgcttcgat
ctcatttcccataaccggacctaccatttcctggctgaggatgaggcagaatgtgtggcg
tggatctccgtgctcagcaacagcaaacaggaagctctgagcatggcgctggacggctgc
agccgagcgggcgaggaggaaagcagcgtggaggatctgacccgggccatcaccgacgac
atccgccgcatgcccggaaacagcagctgctgcgactgcggagctccagatcctgggtgg
ctttccacaaacctcgggattctgacctgcattgaatgttctgggatccacagagagatg
ggggtccacgtctccaggatccagtcgctgagtctggacagtctgggcacctcggacctg
ctgcttgctcggaacgtcgggaattctggttttaacgaaatcctagaggcgaacctgctg
agtccgtccctgaagccgtctcagcacagccaaatgggggagcgcaaagacttcatcctg
tcaaagtaccaggatgttcattttgtgaggcgaagtcagagctctgctgcagctctgcgg
cttggcctgcaggaggcgaccaagagttgtgacatctacagtctgatccagctgcacgcc
cagagggcggacctgagccagcctctgaacacgcacatacaggagaaaggtgagacggcg
cttcatctggccgtcctgttagccgaccgcacatctctccacatcctggactttttggcc
cagaactgtccgaatgtggacgcacaaacatcggcgggaaacacggctctgcactacagc
tgcctgcacaacaagagtgactgtgtgaagctgctgctcagagcgcacgccaacacacac
accaagaaccacttaggagaaacggctctggacgtcagccgacggctgaaacacaccgcc
tgtgagactctgctggaccaggcccagtccaaccagtttgaccatcacgtccacgtggag
tacgaatggaggctccgccatgaggatctgtttgacagcgacgaggactttgaggaaaag
aatggtcctgtaaagaaggagcgctgcttctcctcctcttcctcctccttcaccccctcc
ctgtccttctcctcccgtccgttcatcttcagtcagtcctccctctcctcctcctcctct
gtcgcgcctctgtcgtccggagcgccgggtggggggttgttcagcgtggggaggaggctg
gccatggccatggagctccacagccacccgtccagctcagcccccagccctcctcctcct
cccccatgctcacctgccccacagctgcctcccagagtcaaagctccaaatgttcctcct
cctcctcctcctgcagctggagccaatggagggagggagggagatgaggaagaaggggaa
gtcttcctccccatgacaaccaacagaggaaccaccccccctgccatcgcggttcgacac
aaaaggacctgctccgagtcgaataagcacgattatggagcacccagcagcccccggatc
ttcagcggcccagactcctccttcagccccgcttctcctcgcagcctgaaggcggagcga
gcggaaagaggaattcgtcgggcagagagtgacagcgcctcgtccagctacgtccacctg
gtcaccaaagccccgcccaacggcactcctgctcaccaatgccctcagagctttgacggt
gacgtcagaggccccgcccctctgccccttcctcgccgatcattgaggcctcgcggagcc
gctggtcggcgagctcaggcgctgtacgactgccaggcggaccaccatgacgagctgagc
ttcacagagggacaggtgctggtggtggtgggacaggaggacagcgactggtggcttgga
tacttggaggagaaaccggaccagacgggtttgttcccgtcctccttcgtccagctgctc
tcggactga
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