KEGG   Oryzias melastigma (Indian medaka): 112140023
Entry
112140023         CDS       T07439                                 
Name
(RefSeq) transcriptional regulator ATRX
  KO
K10779  transcriptional regulator ATRX
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    112140023
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oml03000]
    112140023
   03036 Chromosome and associated proteins [BR:oml03036]
    112140023
Transcription factors [BR:oml03000]
 Eukaryotic type
  Zinc finger
   Cys4 GATA-factors
    112140023
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    112140023
SSDB
Motif
Pfam: SNF2-rel_dom ADD_ATRX Helicase_C HDA2-3
Other DBs
NCBI-GeneID: 112140023
NCBI-ProteinID: XP_024118694
Ensembl: ENSOMEG00000004958
UniProt: A0A3B3BEJ3
LinkDB
Position
LG14:11603168..11625065
AA seq 1876 aa
MSAFSSSSKLNLLVNKLHEYLAHSSVEDGTGVQSPDVSGQTHAGFSAGNSTGHGAETSLD
NRYSRRKPSVVIKHSGLDESGDSNESDAVNSTENTNGRLDVTQLPKGTAFVRPEPVDNGR
DEFRGPEFRSRKPNVLRKEFSRKRGGGEHVGIVTCTACGRQVNHFQRDSLYRHPVLKVLI
CKACYKYYSSDEISKDGDGMDEQCRWCAEGGNLICCDFCSNAFCKKCILRNLGRKELSGI
LESKWYCYVCSPEPLFDLVAACNHVLENMEGVWSQQRRRNRVEPDKSGLLPQNICLDKWD
HSGMDGSVVFNYNALQVSKEVTKKAKHLVESTNALNQMFVNFIHSVTKKQQTPSVRVLYF
NSFLAVVKGLKKSLAALEGSLKEEFSDLDLSISWERVFSSDFDALEAESDMELNTSDERC
LSDLQKMAAEHFEDKDSDRNGFMDGRIIHDHFDQETHEARVSAGVMGLNPNQESPVDITK
KLVVKLTPVAMEQPPSPEAPKGEEEEFEMEKNVAEEEKASDEDGKVEANSSEPHLLEEEK
GNRRSPRVKTTPLRRPSDVKAKTSFSAGDSDSDSDPGEIPDATPATNIKEQSLSRAEDDS
DSDEVPAALLERVAMIQSSDEPQSEEDGNQASPNKVAKKCLFWLTKNSPMSPEKMRRKRK
KPDQSSESESSTMVAKAQQDSQMDSSSDDDSQNQIQHLSAVRSIGTSHLGKEKKGMARKQ
RRLQVEESKRKSYREATDSSSSSSSSSSSSSSSEDDDSGSDVSDQKMKPITEGVMPLDVA
AFQQSSGDDEQSGPSWAAGDDDDDDLENRIAKKMLLARIKANYSSSDISSDEEVQEKESQ
SLFDQEVREDIEDGGTRESGEDLASETSDSMPEKPKSRHHLLQLKLTLDEGTSGSNEVEQ
QSKRRAEKNPASEAESDANGNGCHDDEGMSEELSLSEDGEDEPHRIKVEEIEGVCSLKDM
QASCIWLSDSSTEKSDLEEENKEESKPKGTPKGRKEIRKIIEDEELRSETQEALREEEER
RRRLADREQQMEDMREITVIEDELSQVVCPVATKLVLDQDEETKQPLVQVHSNLVTRLKL
HQVDGVQFIWDSCCESVKKANSTPGSGCILAHCMGLGKTLQVVTFLHTVLLSPNLNFRTA
LVVCPLNTVLNWATEFNKWQENLGKDKVKVTVLSAINQPSERIRALQRWHRDGGVAIMGY
KMYTVLSLGPKAATEELKKELKSLLVNPGPDFVICDEGHVLRNQTTITLKAMTAIKTQRR
VVLTGTPLQNNLVEYHCMVSFIKKNLLGSLSEFRNRFINPIENGQCADSTPKDVRIMKKR
AHVLHSVLAGCVQRKDYSELTQFLPPKYEYVLAVRVSPLQCKIYRHYLDLITRENSRPFN
AKKKAGANLFKDFQVLGRIWAHPWCLHLIQMSKESKRTSRKKSQAPQSDVENIAAESSMI
EDKGDESILNEENQEVADPEAREAANSSKEGWYKSLLSEEDAKVMEHSGKMVILFEILRI
AENLDDKVLVFSQSLVSLTLIEEFLAASHRSRDPSSKAGSWIKNVDYYRLDGTMNSTLRK
KWADEFNYSANARGRLFLISTKAGSLGINLVAANRVVIFDASWNPSYDIQSIYRVYRLGQ
VKPVFVYRLLAQGTMEEKIYDRQVTKQSLAHRVVDQQQIERHFTLNELSELYTFEPDLLD
DPNSKKSRRPVSLFPTDLVMSQLLESCRDQIVSYHEHESLLDHKQEEELTEAERKDAWAE
YEAEKEPIALPLTEKQNTLQTKTNEQLEELFNKYKTNVVNLFATMHKIRFFTLEDYVLRL
RQQYPLMPEAELRTKAEIWKQYDEKRSNLERASCWDTITKQKLVISHIQAILNFRRSQGT
YTKVAPVTEVRPSGPI
NT seq 5631 nt   +upstreamnt  +downstreamnt
atgtcggcgttcagctcttccagcaaactgaatttactggtcaacaagcttcatgaatac
ttggcacattccagcgttgaagacggcactggagttcaatcaccagatgtatctggtcag
acacatgcaggcttttcagcaggaaactctactggtcacggcgcagagaccagcctagac
aacagatactcaaggagaaaaccctcagttgtcataaaacactctggactggatgagtct
ggagactcaaatgaaagcgatgcagtgaattcgaccgagaacacaaatggccgtcttgat
gtgactcaattgcctaaaggtacagcttttgtcagacccgaacctgtggacaatggaaga
gacgagttcaggggtccagaatttcgaagccgaaaacccaacgtgctacggaaagagttt
tcaaggaaacgtggaggaggtgaacatgttggaattgtgacttgtactgcttgtggtcgt
caagttaaccacttccagagagactccttgtatcgacatccagttctgaaagtacttatt
tgcaaggcttgctacaaatattactcaagtgatgaaatcagcaaggatggagatggaatg
gatgagcagtgcaggtggtgtgctgaaggcggcaacttaatctgttgtgacttttgcagt
aatgctttttgcaagaaatgtattctacggaatctgggacgaaaggaactgtctggcata
ttagagagcaaatggtactgctacgtctgcagcccagaacctctttttgacctggtggca
gcctgcaaccatgtccttgagaacatggagggcgtgtggagtcagcagcgaaggagaaat
cgagtggagccagacaaatctgggctcttgccacagaacatttgtctggataaatgggac
cacagtggaatggatgggagcgttgtctttaactacaacgctttgcaagtgtctaaagaa
gttaccaagaaggccaagcatttagtggagtcaacaaatgccttaaatcaaatgtttgtc
aatttcattcacagtgtgacaaaaaaacagcaaactcccagtgttcgcgtgctgtatttt
aactcgtttttagctgttgttaaaggcctaaaaaaatctctggcggcactggagggtagt
cttaaggaagaattcagtgacttggatctatctatcagctgggagagggtcttcagcagt
gattttgatgctttagaggccgaatccgacatggagctgaacacttctgatgaaaggtgc
ttgagcgacttgcagaaaatggcagctgaacattttgaagataaagattctgaccgcaac
gggttcatggacggaagaatcatacacgaccacttcgatcaagaaactcatgaagcaaga
gtgagcgcaggagtcatgggcctcaatcccaaccaggaaagtcctgttgacatcactaaa
aagctggtcgtcaaacttacgcctgttgcaatggagcagccgccatcacctgaagctcca
aagggagaggaggaggaatttgaaatggagaagaatgtagcagaagaagaaaaagcgtct
gatgaagatggtaaagttgaagcgaactctagtgaacctcacttattagaggaagaaaaa
ggtaacaggcgttcccctcgtgtcaagacgactcctctacgccgaccgagtgatgtcaaa
gccaaaacctctttttcagcaggagacagcgacagtgattcagaccctggcgagatccca
gacgccacaccagccacaaacatcaaggagcaaagtttgagcagagcagaggacgactcg
gactcagacgaagttcctgccgctctactcgagcgagtagccatgatccaaagctcggac
gaaccccagagtgaggaagatggaaatcaggcgtctccaaacaaggtggcaaagaaatgt
ttgttttggctcactaagaacagcccaatgtcaccagagaagatgcggcgaaagcgcaaa
aagcctgaccagtcatctgagtctgaatcgagcaccatggttgccaaagcccaacaagac
agccagatggactcctctagcgatgacgactcgcagaaccaaatacaacacttaagtgca
gtgaggtcaataggaacttcacacctcggcaaagaaaagaaaggaatggctagaaagcag
agaagactgcaagttgaagagagtaaaagaaaatcttaccgggaagctactgattcttca
tcctcctcctcctcctcctcctcatcctcctcgtcaagtgaagacgatgattcgggcagt
gatgtcagtgatcagaagatgaagccaatcacagaaggtgtgatgccccttgatgtagca
gcattccagcagtcatcaggagatgacgaacagtccgggccctcatgggcagcaggagat
gacgacgacgacgatctagaaaatagaatcgctaagaaaatgctgttggccagaattaaa
gccaactactcttcgagtgatatttcttcagacgaggaggtgcaggagaaggagtctcag
tcactgtttgaccaggaggtcagagaagacattgaggatggtgggactcgggaaagtggt
gaggatttggcctcagaaacctctgacagcatgccagaaaagcccaaatccagacaccac
ctcctccaactcaaactcactttagacgagggaacatcaggaagcaatgaagtagaacaa
cagagcaaaagaagggcagagaagaatccagcctctgaagctgaaagtgatgctaacggc
aacggttgtcatgacgatgagggcatgagtgaggagcttagcctatcagaggatggtgaa
gacgaacctcatagaataaaagtcgaagaaattgaaggagtttgtagtctaaaagacatg
caagcgagctgcatttggttgtctgactccagcacggaaaagagtgatctagaagaggaa
aataaagaggagagtaaacctaaaggtactcccaaaggacgtaaggagatccgcaaaatc
attgaggatgaggagcttcgatctgagacgcaggaagctctccgggaggaggaggagaga
cgcaggcgtttggcagacagagaacaacaaatggaagacatgagagagattactgtgata
gaagatgagctgtctcaggtggtttgccctgttgcaaccaaactggtgttggatcaggat
gaggagaccaagcagcctcttgttcaagttcacagcaatctggttacaagactgaagctt
catcaagtggacggtgttcagtttatttgggacagctgttgtgagtctgtaaagaaggct
aactccactcctggatcaggctgcatcctggctcactgcatgggtttagggaagactttg
caggtggtaaccttccttcacacggtgctactttctccaaacctgaacttccgaacagcc
ttggtggtgtgtccgctcaacactgtcctcaactgggccactgagttcaataaatggcag
gagaacttgggaaaggataaagtcaaagtgacagtattgtctgccataaatcaaccgagt
gagcgtatcagagctctgcagcggtggcacagagacggaggtgttgcaatcatgggatat
aagatgtacaccgtcctgtctctcggccccaaagccgccactgaagaattgaagaaggag
ctgaagtctttattagtgaatccaggtccagactttgtgatttgtgatgaggggcacgtc
cttcgcaatcaaaccaccataaccttgaaagcaatgactgctatcaaaacccaaagaagg
gtggtgctgactggcacgccgcttcaaaacaaccttgttgaataccactgcatggtcagc
ttcatcaagaagaatcttcttggttctctgagtgagttcaggaacagattcatcaacccc
atagagaacgggcagtgcgctgactccaccccaaaagacgtcaggatcatgaagaagcgc
gcccacgtgctccactctgtgttagctggatgtgtgcagaggaaagattactcggagctg
acgcagtttctgcctcccaaatatgagtacgtgctggcggtgagagtttcgcctcttcag
tgtaagatttatcgccactacctcgaccttattacccgtgagaactctaggccttttaat
gcaaagaaaaaagctggagcaaacctgtttaaagacttccaggttctcggccgaatttgg
gctcatccatggtgccttcatctcatccagatgagtaaagaaagcaagagaacgtctaga
aagaagagtcaagcaccacaaagtgatgtggagaacatcgcggcagaaagttcaatgatt
gaggacaaaggagacgaaagtatcttaaatgaggagaaccaagaggttgcagatcctgaa
gccagggaagcagccaacagctcaaaggaaggctggtacaagagcctgctgtctgaagag
gacgccaaagtcatggagcattctgggaagatggtgatcttgtttgagatcctcagaatt
gctgagaacttggatgataaagtgctcgttttcagccagtctttagtctcgctgacccta
attgaagagttccttgcagcttctcatcgttccagagacccgtcctccaaagcgggcagc
tggattaaaaacgttgactactatcgccttgatgggaccatgaattctaccttaaggaag
aaatgggcagatgagtttaactactctgccaatgccaggggacgcctgtttctcatttca
acaaaggccggatcgctgggcatcaacctcgtggcggctaacagagtcgtcatctttgat
gcttcctggaatccttcctacgacatccagagcatttacagagtgtaccgcctgggccag
gtcaaaccagtgtttgtgtaccgcctcttggctcagggtaccatggaggagaagatttac
gatcgtcaggtgactaagcagtctctggcccacagagttgtagaccagcagcagattgag
agacatttcactcttaatgaactgtctgaactctacacatttgagcccgacctgctcgac
gaccccaactccaagaaaagcaggagacccgtctccttatttcccacggatctagtgatg
tctcagctgttagaaagttgcagggatcagattgtgtcgtatcacgagcacgaatccctg
ctggaccacaagcaggaggaggagctcaccgaggcggagcgcaaagatgcctgggctgag
tatgaagccgagaaagagccgatcgccctaccgctcactgagaaacagaacactctgcaa
acaaagacgaatgagcagctggaggagctgttcaataaatacaaaacaaatgttgttaac
ttgtttgcaactatgcacaagattcgattcttcactctagaggactacgtgttgcgtctg
cggcagcagtatcccctcatgccagaggcagagttgaggactaaagcggagatctggaaa
cagtacgatgagaagaggagcaacctggagcgggcctcgtgttgggatacaatcacaaag
caaaaactggtcataagtcatattcaagccattctgaactttcgaagaagtcaaggaacc
tacacgaaggtggcgccggtgactgaagtgagaccgagtggaccaatatga

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