Oryzias melastigma (Indian medaka): 112140172
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Entry
112140172 CDS
T07439
Name
(RefSeq) putative high mobility group protein B1-like 1
KO
K12799
apoptosis-associated speck-like protein containing a CARD
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04217
Necroptosis
oml04621
NOD-like receptor signaling pathway
oml04623
Cytosolic DNA-sensing pathway
oml04625
C-type lectin receptor signaling pathway
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
112140172
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
112140172
04623 Cytosolic DNA-sensing pathway
112140172
04625 C-type lectin receptor signaling pathway
112140172
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112140172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PYRIN
NOA36
RNA_pol_3_Rpc31
BUD22
Cwf_Cwc_15
SID-1_RNA_chan
Paf67
ANAPC15
Myc_N
CIS_TMP
Htt_N-HEAT_1
DUF2457
SGT1
SDA1_HEAT
CDC45
Dicty_REP
Importin_rep_6
Sporozoite_P67
Astro_capsid_p
Motif
Other DBs
NCBI-GeneID:
112140172
NCBI-ProteinID:
XP_024118827
LinkDB
All DBs
Position
Unknown
AA seq
125 aa
AA seq
DB search
MSVQKVLKRCLRKLSKEEFKEFVYQLLDREEHPKVHKKQVEGKDYIDVAKVMVSVFSKNK
VLKVAVEILKEAKLNKQAKRLAAAAKKMLESRKTTKRTSEDEDEDGDEDEDEDEDEDEEE
EEDGR
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtccaaaaagtcctcaagagatgtttgaggaaactctccaaagaggagtttaag
gaattcgtctatcagctgctggacagagaggaacatccaaaagttcacaagaaacaggtg
gagggcaaggactacatagatgttgcaaaggtgatggtgtccgtgttctcgaagaacaaa
gtcctgaaggtggctgtggaaattctcaaagaagcaaagttgaataaacaggcaaaaagg
ctggctgcagctgcaaaaaagatgttggaatcccgtaaaacaaccaagagaacatcagaa
gacgaagatgaagacggagacgaagacgaagatgaagacgaagacgaagatgaagaggaa
gaggaagatggtaggtga
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