KEGG   Oryzias melastigma (Indian medaka): 112140296
Entry
112140296         CDS       T07439                                 
Name
(RefSeq) ras-related protein Rab-11A
  KO
K07904  Ras-related protein Rab-11A
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112140296
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oml04131]
    112140296
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oml04147]
    112140296
   04031 GTP-binding proteins [BR:oml04031]
    112140296
Membrane trafficking [BR:oml04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    112140296
Exosome [BR:oml04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   112140296
  Exosomal proteins of colorectal cancer cells
   112140296
GTP-binding proteins [BR:oml04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    112140296
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_22 PduV-EutP AAA_16 TniB ABC_tran AAA_14 NTPase_1 Gtr1_RagA FeoB_N YtzH AAA_24 DUF3289 AAA_21 FAD-SLDH
Other DBs
NCBI-GeneID: 112140296
NCBI-ProteinID: XP_024118976
Ensembl: ENSOMEG00000017467
LinkDB
Position
LG3:complement(9244217..9255338)
AA seq 215 aa
MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTV
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
LVGNKSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQ
MSERQESDMSPSNNVVNIQVPPTENKPKMQCCQNI
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaccagagatgacgaatacgactatttattcaaagtggtcctaattggggattcc
ggcgtaggaaagagtaacctgctgtcccgctttacccgcaacgagttcaacttggagagt
aagagcaccattggggtggagtttgccacacgcagcatccaggtggacggcaagacggtg
aaggcacagatctgggacactgccggtcaggagcgttaccgcgccatcacgtcagcgtac
taccgtggggcagtgggggctctgctggtctacgacattgccaagcatttaacctatgag
aacgtggagcgctggctaaaggagctgagggatcacgccgacagcaacatcgtcatcatg
cttgtgggcaacaaaagtgacctgcgccacctgagggcagttcctacagacgaggcgcgg
gcgttcgctgagaaaaacggtttgtcttttctggagacatcagctctggactccaccaac
gtggagacggccttccagaccattctgacagagatttaccgcatcgtctctcagaagcag
atgtcggagcgccaggagagtgacatgtcacctagcaacaatgtggtcaacatccaggtg
ccgcccactgagaacaaaccaaagatgcagtgctgtcagaacatctaa

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