Oryzias melastigma (Indian medaka): 112140330
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Entry
112140330 CDS
T07439
Symbol
gtf3c5
Name
(RefSeq) general transcription factor 3C polypeptide 5
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112140330 (gtf3c5)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
112140330 (gtf3c5)
TFIIIC, fungi type
112140330 (gtf3c5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tau95
Tau95_N
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
112140330
NCBI-ProteinID:
XP_024119003
Ensembl:
ENSOMEG00000015122
LinkDB
All DBs
Position
LG12:27248327..27255380
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AA seq
541 aa
AA seq
DB search
MADTKLKDPVATQITPRLDFSLKELTLQGAAEDAVPGSSSTVELRERKLVCVEYPAVVRN
TDKMLDTLGGEQTVSKTFADPNRRLELRFRPQDPFCHFACGNRLSSSNILLRVRRRVRRK
DPKDTEIQMEVVGIIGTTYKFQGQVDFQYLAVDSQGGTHTSLYDKIILRKTETQEFFEQP
VPYFLPPAIFSRLDNPVDYFYRSDTHQTPQMHLNKNAIGLNRARRPHNAIFVSFTDAEVP
TECLKAAKVNWIRCCLNENDRLVEQQMKKMFESRPIWSKNAVRANINVHPEKLKLLLPLF
AYYMVTGPWRSLWVRLGYDPRKDPESKKYQILDFRMRCSTKHGYSVSNMLVKPKRSSLSY
SLPIMLNKAVPQPTSVMDIPDQENPSSSRYSAPSSYKLKESTYIFREGMLPPYRQMFYQL
CDLDVDSIREMIEQSSGTEQQCLERDGWCAAGTTVKLRDLISSMIKKVPGAEKPGLPHIP
KKRRRSEPCPPFQFREVDEEEDEEEEEEECANKEDEEEEDDEFHLSDGSVNEMETEILDY
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcggatacaaaactcaaggaccccgttgctactcaaattaccccgaggctggacttc
agcctgaaggagctgaccctgcagggcgcggcggaggacgcggtgccgggcagctcgtcc
accgtggagttgcgggaaaggaagctggtgtgcgtggaataccccgcggtggtccgcaac
acggacaagatgctggacactctgggcggggagcaaaccgtgagcaaaactttcgctgac
cccaacagacgcctggagcttcgtttccggccccaggaccctttctgtcactttgcctgt
gggaaccgcctctcttccagcaacatcctcctcagagtgaggcggcgggttcgaagaaaa
gaccccaaggacaccgagatccagatggaagtagttgggatcataggaaccacctataaa
ttccagggtcaggtagacttccagtacctggccgtggactctcagggaggaacgcacacg
tctctgtacgataaaataatcctgcgtaaaacggagactcaggagttctttgagcagccc
gtgccgtacttcctgccgcccgccatcttctcgcgcctcgacaaccccgtggattacttc
taccgctccgacacccatcagaccccccaaatgcacttaaacaagaacgcaattggtttg
aatcgcgctcgccggccccacaacgccatatttgtcagcttcaccgatgccgaggtgccc
acagagtgtctgaaggcggccaaggtgaactggatccgctgctgcctgaacgagaacgac
agactggtcgaacagcagatgaagaagatgtttgagagccggcccatctggtccaagaat
gcagtgagggccaacatcaacgtccaccccgagaagctgaagctgctgctgcctctgttc
gcctactacatggtgaccgggccgtggagaagcctgtgggtccgactcggctatgatcct
cgcaaggacccagagtccaagaaataccagattctggacttcaggatgcgctgcagcacc
aaacatggatactccgtgtccaacatgcttgtgaaacccaagcggagctccctgagctac
agccttcccatcatgctgaacaaagcagtccctcagcccaccagtgtgatggatattcct
gatcaggagaacccgagcagcagccggtattctgctccttcctcctacaagctgaaggag
tctacatacatcttcagagaaggcatgcttcctccgtacaggcagatgttctaccagctc
tgtgatttggacgtggacagcatcagggagatgatcgagcagagcagtgggacggagcag
cagtgcttggagcgagatggctggtgtgccgccggcaccaccgtcaagctgagggacctg
atctcctccatgattaaaaaggtcccgggtgctgagaaaccagggttgccccacatcccc
aaaaagaggcggcgcagcgaaccgtgtccaccatttcagtttagagaggtggatgaagag
gaggatgaggaggaggaagaggaggagtgtgcaaacaaggaggacgaggaggaagaagat
gatgaattccatctgtctgacggaagtgtaaatgagatggagacagaaattcttgattat
ttgtga
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