Oryzias melastigma (Indian medaka): 112140340
Help
Entry
112140340 CDS
T07439
Symbol
smyd1a
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1a
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00310
Lysine degradation
oml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112140340 (smyd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112140340 (smyd1a)
Enzymes [BR:
oml01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
112140340 (smyd1a)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
112140340 (smyd1a)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112140340 (smyd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
DUF3336
Motif
Other DBs
NCBI-GeneID:
112140340
NCBI-ProteinID:
XP_024119025
Ensembl:
ENSOMEG00000015440
LinkDB
All DBs
Position
LG12:complement(27130062..27140408)
Genome browser
AA seq
483 aa
AA seq
DB search
MTAGNKENVRLFDAGAKGRGLKASKAFNTGEVVFAEPSYSAVVFDSLASQVCHSCFRRQA
QLHRCAQCRFAHYCDRTCQTACWEEHKQECAAIRKSGKAPSESVRLAARVLWRLHKDGGL
ASDSQLVSVDQLQEHVDQLSQEQLQQLQRDVRVLQDYWSYGSKQHSAEYISHIFGIIKCN
GFTLSDQRGLQAVGVGLFPNLALVNHDCWPNCTAILNHGNHSAVNSALHSPRRIEVRALG
KISEGEELTVSYVDFLQLSADRQNQLKEQYHFECSCKHCSQHISDDLMMAAADGQDSPPS
AEQIKELSAFSKETLEKIEKSRLDRDYSEVLKLCRECLQKQQGVLADTHLHRLRVLSTAA
EVLSYLRQFSEAADCARKMVEGYMKLYHPNNALLGMAIMRAGVTLWHAGQVEEGHSLICK
AYSILMVTHGPNHSVTRDLEKMRGQTERELKMLQQNEDVYAPKKQNISSCSADDSAKAFL
REQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccggaaataaggagaatgtgcggctctttgatgcaggggccaaaggtcggggc
ctgaaggccagcaaagcgttcaacaccggggaagtggtctttgccgagccaagctactct
gccgtggtgtttgacagtctggcctctcaggtgtgccacagctgtttccggcgccaggct
cagctgcaccgctgcgctcagtgccgcttcgcccactactgcgaccgcacctgccagact
gcatgctgggaagagcacaagcaggagtgtgcagccatcaggaagagcggcaaggctccc
agcgaatctgtccgcctggcagctcgtgtcctctggcgtcttcataaggacggcggcctg
gcgtcggacagtcagctggtttcggtggaccagctgcaggagcacgtggaccagctgtct
caggagcagctccagcagctccagagggacgtgcgcgtcctccaggattactggtcctac
gggagcaagcagcactctgccgaatacatctcccacatatttggcattatcaagtgtaac
ggattcacgctgagcgaccagagaggtctgcaggctgtcggcgtgggtctctttcccaac
ctggccctggtcaaccacgactgctggcccaactgcaccgccatcctcaaccacggcaac
cactcagctgtgaactctgctcttcattctccgaggaggatcgaggtgcgggctctgggg
aagatctccgagggcgaggagctgaccgtcagctatgtggacttcctgcagctctctgca
gaccgtcagaaccagctgaaggagcagtaccactttgagtgctcctgcaaacactgcagc
cagcacatctctgatgatctgatgatggcagctgcagatggacaggactctccgccgtct
gccgagcagatcaaggagctctctgccttcagcaaggagactctggagaagattgagaag
tcccgcctggacagggattacagtgaggtgctgaagctttgcagagagtgtctgcagaag
cagcagggagtcctggctgacactcacctgcacagactgcgcgtgctcagcacggccgcc
gaggtgctgtcgtacctgcggcagttctccgaggccgcagactgcgcccgcaagatggtg
gagggatacatgaagctgtatcaccccaacaacgccctgctgggcatggccatcatgcga
gcgggcgtcaccctctggcacgccgggcaggtcgaggagggtcacagcctgatctgcaaa
gcctacagcatcctgatggtgacccacgggcccaaccactccgtcacccgagacctggag
aaaatgcgcggacaaacggagcgggagctgaagatgctccagcagaacgaggacgtttac
gcccccaagaagcagaacatcagcagctgcagcgcagacgacagcgccaaggccttcctc
cgcgagcagtga
DBGET
integrated database retrieval system
