Oryzias melastigma (Indian medaka): 112140501
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Entry
112140501 CDS
T07439
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112140501
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112140501
Enzymes [BR:
oml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
112140501
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
112140501
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
Type II RPTP family
112140501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
Ig_DSCAM-DSCAML_C
Y_phosphatase3
PTPlike_phytase
Ig_3
ig
Pur_ac_phosph_N
PTP_tm
Ig_2
Motif
Other DBs
NCBI-GeneID:
112140501
NCBI-ProteinID:
XP_024119250
Ensembl:
ENSOMEG00000010303
UniProt:
A0A3B3DC35
LinkDB
All DBs
Position
LG16:complement(29244878..29513836)
Genome browser
AA seq
1449 aa
AA seq
DB search
MNTCTFLLILTVQIYADGIEGPTAAGCTFEEDSDPNLCDFTQGEEDDFDWLLFRTYSSPS
SSFDLLKGSYMLVNSSQHAAGHRAQLLLQTLSENDTHCVQFSYFLYSRDGHSPGALRAYV
RVNGGPLGNPVWNMSGSHGKQWHQVELAVSTFWPNEYQVLIEATVSRERQGYIAVDDIMV
LNYPCYKAPHFSRLGDEEINAGQNATFQCVAAGKASEAEKFLLERHNGDILTMASVKHLS
HRRFVVSFQLDSVQRSHQDLYRCVTQSLRGSGVSNFAELVVKVPPSPIAPPQLLRAGSTY
LIIQLNTNSILGDGPIIRKEIEYRASQSPWSEVHGVNMVAYKLWHLDPDTEYHISVLLTR
PGEGGTGPPGPPLVSRTKCAEPMRPLRGLTATDIQSRQLTLQWENLAFNLTRCHTYSVSL
CYRYTMAGGGGDHNTTVRECLAVEHNASRFTLRDLPPYHSIHVRLSLANQEGKKEGREVT
FQTEEDIPGGIAPESLTFTPLDDMIFLKWEEPVEPNGLITQYEISYQSIASSDPGINVPG
PRRAVSKLKNETYHMFSNLHPGTTYLISVRARTAKGFGQTALKEITTNISAPSFDYRDMP
GPLNETESTITVLLRPAQGRGAPVSTYQVVVEEETVKKVKRELGPQDCFPLPMPHSVAQA
QGLPHYYAAEMPPSSLPEASPFTVGDNHTYNGYWNSPLDPRKSYLVYFQAMSNFKGESRI
NCIRIARKASCKDHRSVLERTQHSEDMGLILAVCAGGLVVLILLLGAVIIIIKKGRDYYS
YYPKPVNMNKTPITYRQEKSHMGSMERSFTDQSTLQEDERMALSFMDTHTCGTRSDARSS
VNEASSLLGGSPRHQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTGEGYGFKQEYESFF
DGWDCTKKKDKTKGRQDTLLGYDRHRVKLHPLLGDPNSDYINANYIDIRINREGYHRSNH
FIATQGPKQETLYDFWRMVWQENCFSIVMITKLVEVGRVKCCKYWPDDSEMYGDIKITLL
KTETLAEYTVRTFALERRGYSTKHEVRQFHFTSWPEHGVPYHATGLLAFIRRVKASTPPD
AGPVVVHCSAGAGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYIFI
HDAILEACLCGDTSILMSEFAVTYKDMLRVDSQSNSSPLREEFQTLNSVTPHLDVEECSI
ALLPRNREKNRSMDVLPPDRALAFLVTTEGESNNYINAALADSFHRQAAFIVTPHPLPGT
TADFWRLVFDYGCTAVVMLNQLNQSNSAWPCVQYWPEPGLQQYGPMEVEFLSMSADEDVI
TRLFRVKNVTRLQEGQLVVCQFQFLRWSAYRDVPDSKKAFLNLLAQVHKWQRECGEGRTV
VHCLNGGGRSGTFCACNILLEMIQYQNMVDIFYAVKTLRNCKPNMVESLEQYRFCYDLIL
EYLDCFEGR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctgcacatttctgctgatcttgacggttcagatctacgccgacggcatcgaa
gggccaacagctgctggctgcacgtttgaagaggactctgaccctaatctgtgtgacttc
acccagggggaggaggatgacttcgactggctcttgtttcgaacctacagttcgccttcg
tcgagttttgacctcctaaaggggtcctacatgttggtgaactcctcccagcatgccgcg
gggcaccgggctcagctgttgctgcagactctgagtgaaaacgacactcactgcgtccag
ttcagctacttcctgtacagccgcgatggccacagtcctggggccctccgagcgtacgtc
cgcgtcaacggcggtccgcttggcaatccggtgtggaacatgtccggctcccatggcaaa
cagtggcatcaggtggagctggctgtcagcaccttctggccgaatgaatatcaggtgctg
atcgaggccactgtttccagggagcgtcaaggttacatcgctgtagatgacatcatggtc
ctcaactacccctgctataaggcgccacatttctcgcggcttggggatgaagagatcaac
gctggtcaaaatgctactttccagtgtgttgctgctggaaaagcctcagaggctgagaag
ttcctgctggagagacataatggggacattttaacgatggcatcggtcaagcacctgagt
catcggcgctttgtggtgtctttccaactggatagtgtccagcgttcccatcaagacctt
taccgctgtgtcacgcagtccctcaggggctcaggagtttccaactttgctgaacttgtc
gtcaaagtacctccgtcccccattgcaccgcctcagctgctccgtgccggctccacttac
ctgatcatccagctcaacactaactctatcctgggagatggccccattatcaggaaggag
attgagtaccgtgctagccagtctccatggtcagaagtgcacggagtcaacatggtcgcc
tataagttgtggcacctggatccagacacggagtaccacatcagcgtgctgctgactcgg
cccggagaaggaggaactggcccgcctggacctccccttgtgagcagaaccaaatgtgca
gagcccatgcggcccctgcgaggactcaccgccacagatatccagtccaggcagttgact
ctacagtgggagaatctggcattcaacctgactcggtgccacacgtattcagtgtccctg
tgctaccgctacaccatggcgggaggaggtggagaccacaacaccaccgtgcgcgaatgc
ctggcggtggaacacaacgcctcgcgcttcacactgcgtgatttgccgccctaccacagc
atccatgtccgtctgtctctggcaaaccaggaggggaagaaagagggcagagaggtcacc
ttccagactgaggaggacattcccggaggtatagcaccagagtcgctcaccttcaccccg
ctggatgacatgatcttcctgaagtgggaggagcctgtggagcccaacggtctaattact
caatacgagatcagttaccagagcatcgcatcgtcggacccgggaatcaacgttccagga
cccaggagggcggtgtccaagctgaaaaatgaaacctaccacatgttctccaaccttcac
ccgggaaccacgtacctgatctccgtgcgtgcacgcacagccaagggtttcggccagaca
gcattgaaggaaatcaccaccaacatctcagcgccttcgtttgactacagagacatgccg
ggcccgctgaacgagaccgagagcaccattacggtgctgctgcgtcccgcccaaggcaga
ggagcgcctgtcagcacgtaccaggtggtggtggaggaggaaaccgtgaagaaggtgaag
cgggagctggggcctcaggactgcttcccgttgcccatgccgcacagtgtggcccaggcg
cagggtttaccgcactactacgccgccgagatgccgccaagcagcctgccggaggccagc
cccttcactgtgggcgacaaccacacttacaacggctactggaacagcccactggacccc
cgcaaaagctacctggtttacttccaggcgatgagcaacttcaaaggggagtcgagaata
aattgcatccggatcgcccgcaaagcctcatgcaaagaccaccggagcgttctggagagg
acccaacactctgaggacatggggctgattctggccgtctgcgctggggggctggtggtc
ctcatcctgctgctgggcgcggtcatcatcatcattaaaaaaggaagggactactactct
tactatccgaagcccgtgaacatgaataagacacccatcacctaccggcaggagaagagc
cacatgggctccatggagcgcagtttcacagaccagagcaccctccaggaggacgaaaga
atggccctttccttcatggacacgcacacatgcggcaccaggagtgacgctcgtagttcg
gtgaacgaagccagcagtctgctcggaggctccccgaggcaccagtgcggacgcaagggc
tccccctaccacacggggcagctccacccggccgtccgagtggccgacctgctccagcac
atcaaccaaatgaagacgggggagggctacggcttcaaacaggagtatgagagcttcttc
gatggatgggactgcacaaagaagaaggacaaaaccaaagggaggcaggacactttgctg
ggatatgatcgccaccgagtgaagctccaccctctactgggagaccccaactccgattac
attaacgctaactacattgatattcggattaacagggaaggctaccatcgatccaaccac
ttcatcgccactcagggacccaagcaggagactctgtatgatttctggaggatggtgtgg
caagaaaactgcttcagcatcgtcatgatcactaagctggtggaggttggcagggtgaaa
tgctgtaaatactggcctgacgacagcgagatgtacggcgacatcaagataacgctgctg
aagacggagactcttgctgagtacacagtccgcacctttgccttggagaggagaggatat
tccaccaagcatgaggtccgtcagttccacttcacatcctggcccgaacacggggttccc
tatcacgcgactggcctactggcttttatacgaagagtgaaagcctcaactcctcctgac
gccggccccgtggtcgtccactgcagtgcgggggcagggcggaccggctgctacatcgta
ctggatgtcatgttggacatggcggagtgtgagggcgtggtggacatctacaactgtgtg
aaaaccctgtgctctcggcgcatcaacatgatccagactgaggagcagtacatcttcatc
catgatgccattctggaggcgtgtctgtgcggagacacttccatcctgatgagcgagttc
gccgtcacttacaaagacatgctgcgagtggattctcagagcaattcctcgccgctgcgg
gaagagtttcagacactcaactcagtgactccccatctggatgtggaggagtgcagcatc
gctctgctgcccagaaaccgagagaaaaaccgcagcatggacgtcctgccgcctgaccgt
gccctggccttcctggtaaccacagagggggagagcaacaactacatcaatgctgcgctg
gctgacagcttccaccggcaggcggcttttatagtgacccctcaccctctgcctgggacc
acagcggacttttggaggctggtctttgactacggctgcaccgcagtggtcatgctcaac
cagctaaaccagtccaactctgcctggccttgtgttcagtactggcccgagcccggttta
cagcagtacggacccatggaggtggagtttctgtccatgtcagcagatgaggatgtcatc
actcgtctgtttcgggtcaagaacgtcacacggctccaggaaggccagctggtggtgtgt
cagttccagttcctgcgctggtcggcctatcgagacgttcccgactccaagaaggcgttc
ctcaacctgctggctcaagttcacaagtggcaaagagaatgtggagaaggacgcactgtt
gtgcactgcctcaatggtggtggtcggagtgggaccttctgtgcctgtaacatcctcctg
gagatgatccagtaccagaacatggtggacatcttctatgctgtcaaaactctgcggaac
tgcaaacccaacatggtggagtctctggagcagtatcgattttgctatgacctcatcctg
gagtacttggactgctttgaaggcagatag
DBGET
integrated database retrieval system
