Oryzias melastigma (Indian medaka): 112140609
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Entry
112140609 CDS
T07439
Symbol
lrrc8da
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112140609 (lrrc8da)
Ion channels [BR:
oml04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
112140609 (lrrc8da)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_9
LRR_R13L1-DRL21
LRR_LRWD1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
112140609
NCBI-ProteinID:
XP_024119376
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Position
LG17:complement(17821508..17829360)
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AA seq
852 aa
AA seq
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MFTLTEVASLNDIKPTYRILKPWWDVFMDYLGLVMLMLAIFGTTMQISKDQVSCLPCLGQ
PEDISGAKANSFPQRCTGKAVSPTPTGEPIATTGPRVSKDLTNEAVNEIHSVLQTSAEAE
KYSNQPPPTGIKTNLDFQQYVFINQMCYHVALPWYSKYFPYLTLIHTLILMVSSNFWFKY
PKTSSKIEHFVSILGRCFESPWTTKALSETACEDSEEHKQRLTGASSTPHQMSLEENNES
TSPSQSTPMLGVKISADKPVAEVPSSMTILDKKDGEQAKALFEKVRKFRVHVEDSDFIYK
LYVAQTAVKTVKFILILSYTSTFLAEIKFHHVCEPDIKQLTGYKTFFCTHNMAYMLRKLL
ITYVALILIYGMTCLYSLYWVFRRPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQY
DQLHSKRFGVFLSEVSENKLREISLNHEWTFEKLRQLVFRNAQDQQELHLFMLSGLPNAV
FDLTDLEVLKLELIPEVRFSPKVSQMTTLRELHLCHCPAKVDQTAFAFLRDHLRCLHVKF
TDVAEIPPWVYLLRSLRELNLTGNLNSENNKMIGLESMRDLRHLKTLCLKSNLTKMPTNI
TELSPHLIRLAVHNDGTKLLVLNSLKKMTSLMELELYSCELERIPHAVFSLTNLQELDLK
SNNIRTIEEIISFQHLKRLTCLKLWHNKIINIPASIGQIKSLESLYLSHNKLEALPPALF
TLPKLRHLDVSHNSITILPPDVGLLPNLQHLAINSNKLELLPKPLFRCTKLKVLCLGHNG
LTTIPEAVGQLVQLTQLELRGNCLERLPAQLGSCRLLHKNGLIVEDHLFDTLPVEVKETI
SRETNVSFTSGL
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccctcactgaagttgcatccctgaacgacatcaagcccacgtatcgcatccta
aaaccatggtgggacgtcttcatggactacctggggttggtcatgctcatgctggctata
tttggtacgaccatgcagatctccaaggatcaagtgtcctgtcttccatgtttgggacag
ccagaggacatctcaggagctaaagcaaactccttcccccagaggtgcactgggaaggct
gtgtcaccgacacccactggtgaacccatcgcaaccactggcccacgggtctccaaggat
ctcaccaacgaggctgttaatgagattcactcggttctacaaacttctgctgaggcagaa
aaatattcaaatcaacctccaccaacaggtatcaagaccaacctggactttcaacagtat
gtctttatcaaccaaatgtgctaccatgttgccttgccttggtactccaaatacttccca
tacctcacactcatccacaccctcattctcatggtcagtagcaatttctggttcaaatac
cccaaaaccagttcaaagattgagcattttgtttccattctgggtcgctgttttgagtcg
ccgtggacgaccaaggcgttgtctgaaacggcttgcgaggactcggaggagcacaagcag
aggctgaccggagcctcctcgactccacaccaaatgtctttggaggaaaacaatgaaagc
accagtcccagccagtccacgcccatgctcggggtcaaaatttctgcagacaagcctgtt
gcagaagtgccaagcagcatgaccatcctggacaagaaggatggggagcaggccaaagcc
ctctttgagaaggtgagaaaattcagagtccatgtggaggacagcgacttcatctacaag
ctctatgttgctcagactgctgtcaaaactgtcaagttcatcttgattttgtcgtacact
tccacctttttggccgaaatcaaatttcaccacgtttgtgaacctgacatcaaacaacta
acagggtacaagactttcttctgtacgcacaacatggcctacatgctgaggaagctgctc
atcacctacgtggctctgattctgatctatggaatgacctgcctctactctctgtactgg
gtgtttcgacggcctctaaaggaatactcttttgagaaggtcagggaggagagcagcttt
agcgacattcctgatgtcaagaatgactttgcctttcttctgcacatggtcgaccagtac
gatcagcttcattccaagcgttttggtgtctttttgtcagaggtcagtgaaaacaagctg
agggagatcagcctcaatcacgagtggacctttgagaagctgaggcagctggtctttcgt
aatgcacaagaccaacaggagttgcatctcttcatgctctctggtctcccaaatgcagtg
tttgacctgactgacctggaggtgctgaagcttgagctgattccagaggtgaggttctca
ccaaaggtctcccagatgaccaccctgcgggagcttcatctctgccactgtccggccaag
gtggatcagacagcttttgctttccttcgagatcatctgcgctgccttcacgttaagttt
accgacgtagccgagatccctccatgggtgtatctgctgaggagtctgagggagctcaac
ttaactggaaacttgaactctgagaacaacaaaatgatcggactagagtccatgcgagat
ttgaggcatttaaagacattgtgcctgaagagcaaccttacaaaaatgcccacaaacatc
acagagctttccccgcacctgatccgtttagcggttcacaatgatgggaccaagctgctg
gtactgaacagtttaaagaagatgaccagcttgatggagctggagctgtacagctgcgag
ctggagcgaatcccccacgccgtgttcagtttaaccaatctgcaggagctcgacctgaag
tccaacaacatcagaaccatagaggagatcattagtttccagcacctgaagaggctgacg
tgcctgaagctttggcacaataaaatcatcaatattccagcatccatcggccagatcaaa
tccctggagtctctgtacctctctcacaacaagctggaggccctgcccccagccctgttc
accctgcccaaactgcgacacttggatgtaagccacaactccatcaccatccttcctcca
gacgtggggctgctccccaacctgcagcacctggccatcaactccaacaagctggagctg
ctgcccaagcctctgttcaggtgcaccaagctgaaggtgctgtgtctggggcacaacggg
ctgaccaccatccctgaagcggtgggccagctggtccagctcactcagctggagctgcgg
ggaaactgtctggagagactcccggcccagctgggaagctgccgcctgttgcacaaaaac
ggccttatagtggaggaccacctgtttgacactctgcctgtggaagtgaaggagaccatc
agccgagagactaacgtgtccttcaccagcggcttatag
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