Oryzias melastigma (Indian medaka): 112140703
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Entry
112140703 CDS
T07439
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112140703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112140703
03016 Transfer RNA biogenesis [BR:
oml03016
]
112140703
Enzymes [BR:
oml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
112140703
Messenger RNA biogenesis [BR:
oml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
112140703
Transfer RNA biogenesis [BR:
oml03016
]
Prokaryotic type
tRNA degradation factors
112140703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
112140703
NCBI-ProteinID:
XP_024119484
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MFFPPTEMVEHVRKFASEKIYTVFTDYSHDKISRDEAINKVRLEAEEDLKAVFPQSEPFD
FIESFNIVSKEIFRNLVLNEYRRCDGRELTALRNISCEVDLFRPLHGSALFQRGQTQVLC
SVTFDSLESSIKTDIITTALSGVKDKNFMLHYEFPPYATNEIGKMGGQNRRELGHGALAE
KALRPVIPKDFPFTIRVTSEVLESNGSSSMASACGGSLALMDAGVPISSAVAGVAIGLIS
KANPQKSAEIEDYRLLTDILGIEDYLGDMDFKMAGTNKGITALQADVKIPGLPLKVVMEA
IQQATVAKREILGIMNKCIAKPREKRKENGPVVENVRVPTSRRARFVGPGGYNLRKLQAQ
TGVTISQVDEETFSVFAPTPGAMNEAQDFISEICRDDQEQQLEFGAVYTATITEIRDIGV
MVKLYPNMTPVLLHNSQLDHKRIKHPSALGLDVGQEIQVKYFGRDPTDGRMRLSRKVLQS
PAASVVKTLSEKQSISMGSNISDRSDL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgttcttccctccgacagagatggtcgaacacgttcgaaaattcgcctctgaaaagatt
tatactgttttcactgattatagtcatgataagatttcaagagatgaagccataaacaaa
gtacgattggaggctgaagaagatctcaaagctgtgtttcctcagtcggagccctttgac
ttcattgaatcttttaacatcgttagcaaagaaatcttccgtaatttagtgctgaatgag
tacaggagatgtgacgggagggaactgaccgctttgaggaacatctcgtgcgaggtcgac
ctttttcggcctctgcatggctcggctctgtttcagagaggacaaacgcaggtcttgtgc
agcgtcacatttgactccctggaatccagcatcaaaacagatatcatcaccacagcttta
agtggcgtcaaagacaagaacttcatgcttcattatgaatttcctccgtatgcgactaat
gagatcggtaaaatgggaggccagaacagacgagagctcggacacggagctctggctgag
aaggctctgagaccggtcattcccaaagacttccctttcaccatccgagtcacttctgag
gtgttggagtcaaacggttcatcatcaatggcctcagcctgtggaggaagtcttgctctt
atggatgcaggtgttcctatctcttccgccgtggcaggtgtggccatcggcctcatttcc
aaagctaacccgcagaaatctgcagagattgaggactacagattactgacggatatcctg
ggaatagaggattatctcggagacatggacttcaaaatggccggaacaaacaagggcatc
actgctttgcaggctgatgtgaagattccaggtttacctctgaaggtggttatggaggca
atccagcaagcaacagtggccaaaagggaaatccttggaatcatgaacaaatgcatagca
aagccaagagagaagaggaaagagaacggaccagttgttgaaaacgtgcgggtgcctaca
tctcgaagagctcgctttgtcggtccaggaggatataatcttcggaagctgcaagctcag
acaggcgtaaccataagtcaggtggatgaagaaaccttctccgtgtttgctccaactcct
ggagccatgaatgaagcccaggacttcatcagcgagatctgcagagacgatcaggagcag
cagttggagtttggcgccgtctatactgccaccatcacagaaataagggacattggcgtg
atggtgaagctgtatccgaacatgactcccgtcttgctccacaactcccagctggaccac
aaacggatcaagcatccaagtgctttgggtttagatgtaggacaggagatacaggtgaag
tactttggacgagatccaacagacggcagaatgaggctttcacgcaaggtgttgcagtct
cctgctgcctccgtcgtcaagacgctgagtgagaaacagagcatctccatgggttcaaac
atcagtgatagatccgacttgtga
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