Oryzias melastigma (Indian medaka): 112140768
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Entry
112140768 CDS
T07439
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oml03009
]
112140768 (ddx52)
Enzymes [BR:
oml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112140768 (ddx52)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
90S particles
Helicases
112140768 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
112140768
NCBI-ProteinID:
XP_024119542
Ensembl:
ENSOMEG00000017602
UniProt:
A0A3B3DQQ8
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Position
LG14:19006791..19013528
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AA seq
660 aa
AA seq
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MDAFELFRKLGAGAKFDLKRFGQDAARFKVTRSREGETFSDALSTIDYFRTDPTSGAQIS
DQIEQEEEDEGSGESEAGGKRKRDEDDHMKSKKKKTKNKKVAAKDVGKSLNEGNGIMLTS
SSGRKSQSVQSDEEKSSLKKLRRLHQEKINRIRSQHRINVHGSDVPDPVCTFEELQSEYH
LNPRVLQNLKDAGLNSPTPIQMQAIPLMMHSRELLACAPTGSGKTLAFCLPLLTHLHHPA
NLGFRAVIISPTRELASQTYRELLRLSEGVGFRVHIIDKASLAAKKYGPQSNKKYDILVS
TPNRLVFLLKQDPPAIDLSCVEWLVVDESDKLFEDGKRGFREQLAAIFLACCGAKVRRAF
FSATCTAEVEQWCRLNLDNLVSVNIGHRNTAVDTVEQELLFVGSESGKLVAMRDIVKKGF
LPPMLVFVQSIERARELFHELVYEGINVDVIHAERTQQQRDNVVNSFRSGKIWVLICTAL
LARGIDFKGVNLVMNYDFPTSAVEYIHRIGRTGRAGHQGKAVTFFTESDKPMLRSIANVI
KQAGCPVPDYMIGFKKLHSKVKRILEKKPPKRNTICTTPRFMIKKRGNAKKSEDKTISGG
GHKEKKEPVTQTLKTRERKTKKQKLKGRTAADGEKVTQKPKKASQKKRTDSTGAHCGKEK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttcgagttatttcggaaacttggagctggtgctaaattcgatctcaaaaga
tttggtcaagatgctgccaggtttaaggttaccaggtctcgggaaggggaaactttctcg
gacgctctctccacaatcgattatttccggacagacccgaccagcggagcccagatcagc
gaccagatcgagcaggaggaagaggatgaggggagcggggaatctgaagctggaggcaaa
agaaagcgtgatgaggatgatcacatgaagtccaaaaagaagaaaacaaaaaacaagaaa
gttgcagctaaagatgttggaaaatctttaaatgagggaaacgggatcatgttgacctcg
tcctctggtagaaagagtcaaagcgtccagagcgatgaagagaaatcctcactgaagaag
ctgaggcgacttcatcaagagaagatcaatcgtattcgctctcagcacagaataaatgtt
cacggttccgacgtccccgatcccgtgtgcacttttgaggagctgcagtccgagtatcac
ctgaacccccgtgttctccagaacctcaaagatgcagggctgaactctccaactcctatt
cagatgcaggcaattccactcatgatgcatagtcgggagcttttggcttgtgctcccaca
ggatctggaaagactttggccttttgtctcccgctgctcacccacctgcaccacccagcc
aatctgggtttcagagccgtgatcatctctccaaccagagaactggccagtcagacttac
agagagttgctccgcctctcagagggagtcgggtttcgagttcacattatcgacaaagct
tccttggctgcgaaaaagtacggaccgcagtcgaacaagaaatatgatatactcgtcagc
acccccaaccggctggttttccttctcaaacaggatcctcctgctattgacctcagctgt
gtggaatggctggttgtggacgagtctgataagctttttgaagacgggaagaggggcttt
agggagcagctggccgccatttttctcgcctgttgcggtgcgaaggtgcgcagggctttc
ttcagcgccacatgcacagccgaagtggagcagtggtgccgcctgaacctcgacaacctg
gtttctgtgaacatcggacacaggaacaccgcagtggacacggtggaacaggagctgctg
tttgtcggctcggagagcggaaagctcgtagccatgagagacatcgtcaaaaaagggttc
ctaccccccatgctggtgtttgtgcagtctatagaaagagcgcgggagctgtttcacgag
ttggtttacgaaggcatcaacgtagacgtgattcatgcggagcgcacacagcagcagaga
gacaacgtggtgaacagttttcgatccgggaagatttgggtgctgatttgcacagctctg
ctcgccagaggaatcgatttcaaaggagtcaacctcgtaatgaactacgacttccccacc
agcgctgtggaatatattcatcgaatcggtcgcacaggcagagctggacatcagggaaaa
gcagtcaccttttttacagagagtgacaaaccaatgctgcgcagcattgcaaatgtcatc
aaacaagctggctgtcccgtacccgactacatgatcggcttcaagaagttgcacagcaaa
gttaaacggatacttgagaagaagcctcccaagagaaacactatctgcacaactccacgc
ttcatgataaagaaaaggggcaatgcaaagaaaagtgaagacaagacaatttctggtgga
gggcacaaagaaaaaaaagaacctgtcacgcaaactctgaagaccagggaaaggaaaaca
aaaaaacagaagctgaagggaagaactgcagcagacggagaaaaggtgactcagaagccc
aagaaagcatcacaaaagaagaggacagattctactggtgctcattgtggaaaggaaaaa
tga
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