Oryzias melastigma (Indian medaka): 112140806
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Entry
112140806 CDS
T07439
Symbol
nectin1a
Name
(RefSeq) nectin cell adhesion molecule 1a isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03266
Virion - Herpesvirus
oml04514
Cell adhesion molecule (CAM) interaction
oml04517
IgSF CAM signaling
oml04520
Adherens junction
oml05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
112140806 (nectin1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
112140806 (nectin1a)
04517 IgSF CAM signaling
112140806 (nectin1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112140806 (nectin1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112140806 (nectin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112140806 (nectin1a)
04090 CD molecules [BR:
oml04090
]
112140806 (nectin1a)
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
Nectin family
112140806 (nectin1a)
CD molecules [BR:
oml04090
]
Proteins
112140806 (nectin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_2
Ig_3
I-set
ig
Ig_PVRIG
Ig_6
C1-set
DUF6313
Motif
Other DBs
NCBI-GeneID:
112140806
NCBI-ProteinID:
XP_024119583
Ensembl:
ENSOMEG00000019019
LinkDB
All DBs
Position
LG14:complement(18507076..18531167)
Genome browser
AA seq
519 aa
AA seq
DB search
MDHAGLWIFLITTCVIPEVHGQTVEMDDGKSGYVGSKVDLRCRFINSSPPVKISQVTWQK
LVNGTKQSVAIANPSLGVSVAPPYRDRVTFRNAAVRRRTPSLEDTTIIFSSLRLSDEATY
ICEYTTFPAGNRENSVNLTVHVRPTTQMSLSSPTLVARSSNLKTPVATCISANGKPPATI
RWESRVPGEVTTREYRNSDGTFTVQSDYTLVPSKETHKETLTCVTTYNEEVYTDSVTLDI
QYEPDVTVEGFDGNWYLNRENVRLTCQADANPAVSLYQWRLVNGSIPSSVEVRDSVLLFK
GPITYDLQGTYVCDATNSIGTTSASIEVNIIEKPQPQIATGDVVSVIALLLAAGVLMGIT
ITVLVLKIRTRKDNSSNDSPSRKLSQPMKRRPGEDIQHLGKFYEELPNTADYVSYRLACN
KEDYPEPYSPPINPPLSFLPQNPHHTSQTLPSKGTSCTSTPLKNTFAPPSYTTAIFKYPS
VPGTSGQLKEATRFKAETPAGAPSLVSRDWSKDADLFFA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggatcacgctggactttggatatttctaataacaacttgtgttattccggaagtacat
ggacagacggtggaaatggatgatgggaagtcaggatacgtcggctcaaaggtggatctc
cgctgtcggttcatcaacagttccccacctgtcaaaatctcccaggtaacgtggcagaag
ctggtgaacggcaccaagcaaagcgtggcaatcgcaaatccatccttaggcgtctctgtg
gcgccgccctatcgagaccgtgtcacgttcagaaacgcggctgtgaggaggcgcaccccc
tctttggaagacacgaccatcatcttctcctcgctccgcctctctgacgaagccacgtac
atctgtgaatacacaacatttcctgcagggaatagagagaactctgtgaatctgactgta
catgtccggccgaccacccagatgagtctttcctcccccacactggtggctcgttcatct
aacctgaaaacccctgtggcaacctgcatctctgcaaatggaaagcctccggccaccatc
aggtgggagtcgagggtgcctggagaagtgaccacccgggagtacaggaactctgatggg
acatttactgttcagagcgactacactttggtgcccagcaaggagacgcacaaggagacg
ctcacctgtgtcacaacctacaacgaagaggtctacacagacagcgtcactctggatatt
caatatgagccagatgtgacggtggagggctttgatgggaactggtacctgaatcgagaa
aacgtccgtctgacctgccaagctgatgccaacccagcagtctctctgtatcagtggaga
ctggtgaacggttcaatccccagcagcgttgaggtccgagacagcgttcttttgttcaag
gggccgatcacgtacgacctgcagggcacctatgtgtgcgacgccaccaacagcatcggg
accacctcagcatccattgaggtcaacattatagaaaagccgcagccgcagattgcaaca
ggtgatgttgtcagtgtgattgccttattgttggctgctggagttctcatgggcatcacc
atcactgtcctggtgctcaaaataagaaccagaaaagataactcatcaaatgattctcct
tcgagaaaactgtcccagcctatgaaaagaagaccaggggaagacatccagcatctgggg
aaattttatgaggagcttccaaacacggcagactacgtgagctaccgactggcctgtaac
aaagaggactaccccgagccctactccccaccaatcaaccctccactgtcctttctgcca
cagaacccccaccacacctcacagacattgccttcaaagggcaccagctgcaccagcacc
cctttgaagaacacttttgcccctccttcatacaccacagccatcttcaagtacccctct
gtgccaggcacctccggccagctaaaggaagcgacaagattcaaagcggaaacgcccgcc
ggagcgcccagtttggtttcacgcgactggtccaaggacgccgatcttttctttgcttaa
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integrated database retrieval system
