KEGG   Oryzias melastigma (Indian medaka): 112140846
Entry
112140846         CDS       T07439                                 
Symbol
plod1a
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml00310  Lysine degradation
oml01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:oml00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    112140846 (plod1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oml04147]
    112140846 (plod1a)
Enzymes [BR:oml01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     112140846 (plod1a)
Exosome [BR:oml04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   112140846 (plod1a)
SSDB
Motif
Pfam: 2OG-FeII_Oxy 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 112140846
NCBI-ProteinID: XP_024119626
Ensembl: ENSOMEG00000022732
UniProt: A0A3B3DZA4
LinkDB
Position
LG7:32964910..32978922
AA seq 728 aa
MRAAVFLAWFCSLLLLAAGEQPRIPEEKLLVLTVATEETDGFRRFLRSARNFNYTVKVLG
RGQKWSGGDYTTAPGGGQKVRLLKEALQEMESEDQVLLFTDSYDAVFASGPKELLRKFQQ
AKQRVVFSSERLIWPDRHLEDKHPHVREGNRFLGSGGFMGYLSNVKEMVADWTGEDGDSD
QLFFTKIYIDPDKRKSFNITVDNKCRLFQNLHGALDDVVLKFEDGRVRARNVLYDTLPVL
IHGNGPTKLQINYLGNYIPNSWTFETGCTTCQEDLRPLAALKDSEYPLVSIGIFIQQPTP
FVSVFFERLLKLQYPKNRLKLFVYNQEPHHEHQVSSFLQDHGGLYRDVRSVTPEEDMDSA
GARDLALDICRKDQDCEYFFNLDVEVVLKNENTLKILIEQNLPVVAPMITRAGRLWSNFW
GAVSADGYYARSEDYVDIVQGRRVGVWNVPYVSNVYLLKADLLRSELTDSDVFRSQSLDP
DMAFCHGLRSAGVFMFVTNMQTFGRILSTENYRSSHLHNDLWQIFENPVDWEERYIHENY
SRIMKDQLIETPCPDVYWFPVFSDIACDHLVEEMEHFGKWSGGGNVDTRIQGGYENVPTI
DIHMNQVSYEKEWQKFLLEYVAPITEKMYPGYYTKAQFDLAFVVRYRPDEQPSLRPHHDA
STFTINIALNQAGQDYEGGGCRFIRYGCSIQAPRKGWALMHPGRLTHYHEGLPTTAGTRY
IAVSFVDP
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgagagccgctgtcttcctggcgtggttctgttctcttctcctgctggcggccggggag
cagcctcggatcccggaggagaaacttttagttctgactgtcgcaaccgaagagacagac
ggcttcaggcgttttctaaggtctgctagaaactttaactacaccgtgaaggttctcggc
agaggtcagaagtggagcggcggcgactacacgacggctcctgggggaggacagaaggtg
cggctgctgaaagaggccttgcaggagatggagagcgaggaccaagtcctccttttcact
gacagttatgacgcggttttcgcctcgggccccaaagagctcctccggaagttccagcaa
gccaagcagcgggtggtgttctcctccgagaggctgatctggcccgacaggcatctggag
gacaaacacccccacgtccgggaggggaaccggttcctgggctccgggggtttcatgggt
tacctctccaacgtcaaggagatggtggcagactggacaggagaggacggcgacagcgat
cagctgttcttcaccaagatttacatcgaccccgacaaacggaaatccttcaacatcacc
gtggacaacaaatgccggctgttccagaaccttcatggagctttggacgacgtggtgctg
aagtttgaggacggacgagtccgagccaggaatgtcctgtatgacactcttccagtgttg
atccacggaaacggacccaccaagctgcagatcaactacctggggaactacattcccaac
tcgtggacgtttgagactggatgcacgacttgtcaggaggatctgcgtccactcgccgct
ctgaaggacagcgaatacccgctggtcagcatcggcatcttcatccagcagcccacgccg
tttgtctcggtgttctttgaacgcctcctgaagctccagtaccccaagaacagactcaag
ctgttcgtctataaccaggaacctcatcatgagcatcaggtcagctccttcctgcaggac
catggaggtctgtatcgggacgtgcggtccgtcacgcctgaggaggacatggactcggct
ggggcgcgtgacctggccttagacatttgccggaaggaccaggactgcgaatatttcttc
aacttggacgttgaggtggtcctaaagaacgagaacactctgaagatcctcatcgaacaa
aacctgccggttgtggcacccatgatcactcgagcgggccgactgtggagcaacttctgg
ggggccgtcagcgccgacggatactacgcccggtcggaggactacgtggacatcgttcaa
ggacgaagagtgggggtgtggaacgtcccgtatgtgtccaacgtgtacctgctgaaggcc
gacctcctgagatcggagctgacagactctgacgtgttcaggtcgcagagcttagacccc
gacatggcgttctgccatggccttcgcagcgcgggagtcttcatgtttgttaccaacatg
cagaccttcggccgcatcctgtctacggaaaactaccggagctctcacctgcacaacgac
ctgtggcagatctttgaaaacccagtggattgggaggaacgctacattcatgagaactac
agccgcatcatgaaggatcagctgatcgagacgccctgccccgacgtttactggttcccc
gtgttctccgacatcgcctgcgaccacctggtggaggaaatggagcactttgggaaatgg
tcgggggggggcaacgtggacaccaggatccagggcggctacgagaacgtccccaccatc
gacatccacatgaaccaggtcagctatgagaaggagtggcagaagttcctcctggagtac
gtggcccccatcaccgagaagatgtacccgggttactacaccaaggctcagttcgacttg
gccttcgtggtccggtaccggcccgacgagcagccgtctctcaggccgcaccacgacgcc
tccaccttcaccatcaacatcgctctgaatcaagcgggtcaggactacgagggcggcggc
tgcaggttcatccggtacggttgctccatccaggctcctcggaaaggctgggctctgatg
cacccgggccgcctcacccactaccacgagggcctgcccaccaccgccggcacgcgctac
atcgccgtgtccttcgtggatccatga

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