Oryzias melastigma (Indian medaka): 112140873
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Entry
112140873 CDS
T07439
Symbol
dpf2
Name
(RefSeq) zinc finger protein ubi-d4 isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112140873 (dpf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112140873 (dpf2)
03036 Chromosome and associated proteins [BR:
oml03036
]
112140873 (dpf2)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112140873 (dpf2)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112140873 (dpf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
PHD_2
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
112140873
NCBI-ProteinID:
XP_024119664
Ensembl:
ENSOMEG00000002306
LinkDB
All DBs
Position
LG14:complement(13023560..13032154)
Genome browser
AA seq
414 aa
AA seq
DB search
MAAVVENVVKLLGEQYYRDALEQCHNYNARLCAERSVRMPFLDSQTGVAQSNCYIWMEKR
HRGPGVAPGQLYTYPARRWRKKRRSHHPPEDPRLIFPPVKSELDLGLKKDALLSSDGSSL
EALLKGDSLEKRTAADLRGSEEDSNQSDYTGSLNPASRIRKRILEPDDFLDDLDDEDYEE
DTPKRRGKGKGKGRGVGSSRKKLDTAALEDRDKPYACDNTLKQKHISKPSERVCGKRYKN
RPGLSYHYAHSHLAEEEGEEKDDLDMSEPALPPPNEPKTPKKGPDGLALPNNYCDFCLGD
SKTNHKTGQSEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNMCGTSEND
DQLLFCDDCDRGYHMYCLNPPMSEPPEGSWSCHLCLALLKDKASIYQNQNMPTS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgttgttgagaatgttgtcaaacttttgggagagcagtactacagagacgcc
ctggagcagtgtcacaactacaatgcccggctgtgcgcggagaggagcgtccgcatgccg
ttcctggactctcagaccggcgtggctcagagcaactgctacatctggatggagaagagg
catagaggaccaggcgtggcaccaggacaactctacacgtatccagccaggaggtggagg
aagaaacgcagatctcatcatcctccggaggatcctcggctgatcttccctcctgtaaag
tcagagctggatttagggctgaagaaggacgctttgctgtcgtcagacggcagcagcctg
gaggcgctgctaaagggggattccctggaaaaacgaactgctgcagatctccgcggatcg
gaggaggattcaaaccagagcgattacacgggcagcctgaacccggcgtctcgcattaga
aagagaatcctcgagccagacgacttcctggatgacctggatgatgaagactatgaagaa
gacacgcctaagagaaggggcaaagggaaaggaaagggccgcggggtcggaagcagccgg
aagaagctggacacggcggcgctggaggaccgggacaagccgtacgcctgcgacaacact
ctcaaacagaagcacatttccaaaccttctgaaagagtgtgtgggaagcgttacaagaac
cgtccaggcctcagctaccattacgctcactcccacctggccgaggaggaaggcgaggag
aaggacgacctggacatgagcgaacccgccctgccgccgcccaatgagccaaagactccc
aagaaaggtccggacggtctggcgctgcccaataactactgcgatttctgtctgggagac
tccaaaaccaatcacaagacgggacagtcagaggagctggtgtcctgctccgactgtgga
cgctcaggccacccgtcctgcctgcagtttactccggtgatgatggccgccgtgaagacg
tatcgctggcagtgtatagagtgcaaatgctgcaacatgtgcggcacttcagagaatgac
gatcagctcctgttctgtgacgactgcgacagaggctatcacatgtactgtctgaacccc
cccatgtccgagcctccagagggaagttggagctgtcatctgtgtctggccctcttgaaa
gacaaagcatccatataccagaaccagaacatgcccacatcatga
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