Oryzias melastigma (Indian medaka): 112140875
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Entry
112140875 CDS
T07439
Symbol
tbc1d25
Name
(RefSeq) TBC1 domain family member 25
KO
K24799
TBC1 domain family member 25
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112140875 (tbc1d25)
Membrane trafficking [BR:
oml04131
]
Others
Specific organelles associated proteins
Auto phagosome
112140875 (tbc1d25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
112140875
NCBI-ProteinID:
XP_036068899
Ensembl:
ENSOMEG00000022886
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Position
LG7:32863039..32880632
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AA seq
752 aa
AA seq
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MAGEEERGVVRVKVRKCDGALPVEFRSFAVDPQITSLEVLQHILIRAFDLSGKRNFNISY
LCRDRSSAEMYLSLLSDWDLDVAFLSAAKPFLQLKMDVKPSEDSPVMEDWDIISPKDVIG
SEQLLAEKTRSLASAALPFTQSLLSQVGRTLSRVQQAFTWSYGEEMKPFKPPLSDSEFHS
YLNGQGQLTRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGQERMDYMKRKTREYD
QLKREWTARVSQDELEFIRGNVLKDVLRTDRAHPYYAGSEDSPHLTALTDLLTTYAITHP
QISYCQGMSDIASPILAVMDNEAHAFICFCGIMKRLEGNFRPDGQLMSVKFQHLKLLLQY
SDPEFYSYLVSRGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLPPDPPETEVELV
GPRSGVSGRGEENGHGEDAEQKETQRRRHMLRPSREEACPSGAAIAEEMEEAGSEGPGVT
PERSEVRRQTSFGEFKYYSARNEDSFEMEDSEPTQDAVTSGPETNPSSRQSTVDSEDDPG
EKTPLIKTDDSPDSSACQTSGDSAHIFNGADAFPGTVPGAPASVTSPSHSHSRSVLSSPI
LSFAGGPAPSAASIKPCSLPPPQEFGKGNPFMLFLCLSILLEHRDHIIKNSLDYNELAMH
FDRLVRRHNLTRVLQRAKALFADYLQSEVWDSEEGDEVSSDSPTAAPQLSPPLTVSPRPL
YSPLASPPSSPNSTYNLSSTIPSPPAPLSPTS
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgaggaggagaggggggtggtccgagtcaaagtgaggaagtgtgacggcgct
cttcctgtggagtttcgctcgtttgccgtggatcctcagatcacgtctctggaggtcctg
cagcacatcctgatccgagccttcgacctgagcgggaagcggaacttcaacatcagttac
ctgtgtcgcgaccgcagcagcgctgaaatgtacctgtccctgctgtccgactgggatctg
gacgttgcttttctcagtgcagccaaaccgtttctgcagctgaagatggacgtgaagccc
tcggaggacagtccggtgatggaggactgggacatcataagccccaaagacgtgatcggc
tccgagcagcttctagcagagaagacgagatctctggcgtctgcagctcttcccttcacg
cagtcgctgctctcccaggtgggacgtaccctgtccagggtccagcaggccttcacgtgg
tcctatggggaggagatgaagcctttcaagcctcccttaagcgactctgagttccacagt
tacctgaatggacagggtcagctgacccggccagaggagctccggctgcggatctaccac
gggggggtggagccctctctgcgcaaggtggtgtggcggtacctcctgaacgtttacccc
gacggcctgaccggacaagagaggatggactacatgaagaggaagacccgggagtacgac
cagctgaagagggagtggaccgctcgggtcagccaagacgagctggagttcatccggggg
aacgttctgaaagacgtgctgagaacggaccgggcccatccctactacgccggctctgaa
gacagtccacacctgacggcgctcaccgacctgctcaccacgtacgccatcactcatcct
cagatctcctactgtcagggcatgagcgacatcgcctctcccatcctcgccgtgatggac
aacgaagcccacgccttcatctgcttctgcggcatcatgaagaggctggaggggaacttc
cgcccggacggccagctcatgtccgtcaagttccagcacctgaagctgctgctgcagtac
tcggacccagagttctactcctacctggtttctcggggggccgacgacctgttcttctgc
taccgctggctcctcctggagctgaagcgggagttcgcttttgacgacgccctgaggatg
ctggaggtgacgtggagctctctgcccccagaccctcccgagaccgaggtggagctcgtg
gggccgcgctccggcgtgtcgggccgcggcgaggagaacggccacggagaggacgcggag
cagaaggagacgcagcggaggcggcacatgctgaggccgtcacgggaggaggcgtgtccg
agcggcgccgccatcgccgaggagatggaggaggctgggagcgagggtcccggcgtcacg
ccggaaaggtcggaggtgcgcagacaaaccagttttggagagttcaaatactactcggct
cgaaacgaggacagttttgagatggaggactccgagcccacgcaggacgccgtcacctca
gggccagaaaccaacccctccagccgccagtccaccgtggacagcgaggacgacccggga
gagaagacccccctcattaaaaccgacgacagccccgactcctcggcctgtcagacgtca
ggagactccgcccacatcttcaacggagccgacgcctttcccggaactgtccccggagcg
cccgcgtccgtcacttccccctcccacagtcacagccggtccgtgctctcctcgcccatc
ctgtcctttgcaggaggccccgccccctccgccgccagcatcaagccctgctccctgccc
ccgccccaggagtttggcaaaggaaaccccttcatgctgttcctgtgcctgtccatcctg
ctggagcaccgcgaccacatcatcaagaactcgctggactacaacgagctcgccatgcac
ttcgaccgcctggtgcggcgccacaacctgacccgggtcctgcagcgggccaaagccctg
ttcgcagactacctgcagagcgaggtgtgggactcggaggagggggacgaagtcagctcg
gactcccccaccgccgccccccagctctcgccccccctaaccgtctccccccgccccctc
tacagtccgttagcctccccgccatcgtctcccaactccacctacaacctgtccagcacc
attccctcgccgccggcgccgctctcccccacatcctga
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