Oryzias melastigma (Indian medaka): 112140970
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Entry
112140970 CDS
T07439
Symbol
rabep1
Name
(RefSeq) rab GTPase-binding effector protein 1 isoform X2
KO
K12480
Rab GTPase-binding effector protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112140970 (rabep1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112140970 (rabep1)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112140970 (rabep1)
Protein recycling
Rab4 associated proteins
112140970 (rabep1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rabaptin
Rab5-bind
Fez1
Fib_succ_major
Unstab_antitox
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
112140970
NCBI-ProteinID:
XP_024119775
Ensembl:
ENSOMEG00000002008
UniProt:
A0A3B3B6A8
LinkDB
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Position
LG14:26942737..26977814
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AA seq
856 aa
AA seq
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MTEEASGSPLTSQHDEVLQQRVAALEQERTEFIRLKQQLEAEFNQKRAKFKELYMSKEEE
LQRRTAALEEAQNEIISMKAQLTQARAEIETIKAVATVSENTKQEAIDQVRSQWQEEVAS
LQAIMKDTVCEYEVQFHQRLEQERAQWNQYREAMERELGDLRRRLTEGQEKENLEDEMKK
AQEDAEKLRSVVMPLEQEIAALKAKLTSSEDKVKELEASKVKELNHVLEAEKSCRTDLEM
YVAVLNTQKSVLQEDAEKLRKELHEVCHKLELERQQHNQLKHTWQRANDQFLESQRLLMR
DMQRIESVLSSEQLRQVEEMKKKDQEEEEKERLSQVKDLQEEDGGDNTEPLEDYLGLSAE
EYHTNHSTHGSVHSLDTDVVAGSPSDPYKDNLRRVQSTDSLGSSLSSQQALGGHNHKAKS
ASNLDESDFGPLVSADCGATDTSFGETTSVSSIKLTASHFLLTKDQEKAIKAMTPEQEET
ASLLSSISQAPDTAYLPPAGYQLVSDTEWNLLQQEVKNAGRKLGRRCDMCSNYEKQLQAI
QGQEADTRDQVKKLQVMLRQANDHLERTMAEKQNLEDSIKMGNEENAAKVSALTQRVQES
ETLLGALQQAFSEAKRKTQEQMVVLVKSREQVAEELSRLQRDNESLQGKHRLHVELQQQE
DFQMPNTVQELQGLVFQCREDMVALRTSADHMEEKLKAEILFLKEQIQAEQCLKENLEDT
LQLEIEGCKEEIASFSSLKTELERIKAEKEKLQSSLTEKTETLERLGGLRGSLEQQVKEL
TSAKSALEIQVLDEKDKAQRLQTELDVSEQVQKDFVKLSQTLQVQLERIRQAESLDRIKV
ILNDTNLTDINQLPET
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggaggcctcgggatcccccctcacatctcagcatgatgaggtactccagcag
cgggtggccgctctggagcaggagaggacggagttcatccgactcaagcagcagctggag
gccgagttcaaccagaagagagccaagttcaaggagctctacatgtccaaggaagaggag
ctccagaggaggaccgcggcgctggaggaggctcagaacgagatcatctccatgaaagcc
cagctgactcaggcccgggccgagatcgagaccatcaaggccgtggccaccgtctcggaa
aacaccaagcaggaagccatcgaccaggtccggagccagtggcaggaggaggtggcgtcg
ctgcaggccatcatgaaagacacggtatgcgaatatgaggtccagttccaccagcgcctg
gagcaggagcgggcccagtggaaccagtaccgcgaggccatggagagggaactgggcgac
ctgaggcggcggctcaccgagggtcaggagaaggagaacctggaggacgagatgaagaag
gcccaggaggacgcggagaagctgcggtcggtggtgatgccgctggagcaggagatcgcc
gctctgaaggccaagctgacctccagcgaggacaaggtgaaggagctggaggcctcaaag
gtgaaggagctcaaccatgttctggaggccgagaagtcgtgtcgaacagacctggagatg
tacgtggccgttctgaacacgcagaagtccgtcctgcaggaggacgccgagaaactacgg
aaggagcttcatgaagtctgtcacaaactggagctggagcggcagcagcacaaccagctg
aagcacacatggcagcgagcgaacgaccagttcctggagtcccagcgtctgctcatgagg
gacatgcagaggatcgagagcgtgctctcctccgaacagctgcggcaggtggaggagatg
aagaagaaagaccaggaagaggaggagaaagagaggctgagtcaggtgaaggacctgcag
gaggaggatggaggagacaacacggagcccttggaggactaccttggattgagcgcggag
gagtatcacaccaaccacagcacacacggttctgtgcactccttggacaccgacgtggtg
gcggggagcccctctgacccctacaaggacaacctgcggcgagtccagtccaccgacagc
ctcggctcctccctgtcctcccagcaggctctcggaggccacaaccacaaggccaaatcg
gccagtaacctggacgagtcggactttgggcccctggtttcagccgactgcggggcgaca
gacactagttttggcgaaaccacgtccgtcagctcgatcaagctaacggcgagccacttc
ctgctgactaaagaccaggaaaaggccatcaaagccatgacgccagagcaggaggagacg
gcgtcgctgctgtccagcatctctcaggcccccgacaccgcctacctgccgcctgcaggc
taccagctggtcagcgacaccgagtggaacctgctgcagcaggaggtgaagaacgccggc
aggaagctgggccggcgctgcgacatgtgctccaactacgagaagcagctgcaggccatt
caaggacaggaggcggacactcgagaccaggtgaagaagctgcaggtcatgctccgccag
gctaacgaccatctggaaagaacgatggcggaaaaacaaaatttggaagattcaattaaa
atggggaacgaggaaaatgctgctaaggtgtctgctctcacgcagagagtccaggagtcc
gaaactctgctcggcgctctccagcaggctttcagtgaggccaagaggaagactcaagag
cagatggtggtgctggtgaagtccagggagcaggtggcagaggagctgagtcgcctgcag
agagacaacgagagcctgcagggcaaacaccggctgcacgtggagctgcagcagcaggag
gacttccagatgcccaacactgtgcaggagctgcagggtctggtgttccagtgtcgtgaa
gacatggtggcgctgcggacgtctgcagatcacatggaggagaagctgaaggcggagatc
ctgtttctgaaggagcagatccaggcggagcagtgcctgaaggagaacctggaggacact
ctgcagctggagatcgagggctgtaaggaggaaatcgcctctttttctagtttgaagacg
gagctggagcgaataaaagcagagaaggagaagctgcagagcagtttaacagaaaagacg
gagacgctggagcgcctcggcggtctgaggggcagcctggagcagcaggtcaaggagctc
acgtctgcaaagagcgctctggaaatccaggtcctggatgagaaggacaaagcccagcgg
ctgcagaccgagctggacgtgagcgagcaggtccagaaggacttcgtcaagctttctcag
acgctacaggtccagttggagcgaatacgacaagccgagtctttggaccggatcaaagtg
attctcaacgacaccaacttgacggacatcaaccagcttccagagacatga
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