Oryzias melastigma (Indian medaka): 112141019
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Entry
112141019 CDS
T07439
Symbol
lrrc32
Name
(RefSeq) transforming growth factor beta activator LRRC32
KO
K26316
transforming growth factor beta activator LRRC32
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112141019 (lrrc32)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_6
LRR_5
LRR_9
LRR_EndoS
LRR_NXF1-5
CSS_CxxC
Motif
Other DBs
NCBI-GeneID:
112141019
NCBI-ProteinID:
XP_024119838
Ensembl:
ENSOMEG00000001980
UniProt:
A0A3B3B684
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Position
LG14:27002699..27014017
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AA seq
677 aa
AA seq
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MRRQESAEGSVAVRAWGGEDVKTGGVVRMRRHLNVSTMAALQLLFLPLVGCMAASAHPPG
RLPPCQVVQMDVFCSNLRLRGVPVNLPRGVQTLDLSLNQVQNLSRETLGFHTGFHRLNLH
ANKIHFIQPGLFKDMPDLKVLDLSRNHLNVFAVSKVNVGPLSALKSLDLSGNGFYTGMSD
YFLADSPSLESVSLSDNSITKVTQDTFKGSLSLKKISLHNNVILEIEDGAFDSLQNLTEL
DLSKNSITCIKDFNLHSLEVLNLSKNSLEDFQSTTAKLDFKLVSLDLSENKLLYFPLLPK
NNVLEHLDISRNHIQTVTESSEKTYLVFEKLRYLDMSYNNLKDVPEDFFKCMGSLEVLNV
SHNCISSFSITEGHVLQKVKVINLSYNSLQTLRLKKDALLYLRKLYLQGNDLKQLDQQIF
QSLPNIRHLQLQENNLRVCSSEENQQDPPGCVFFHSIASLRFLNISENNLRTLPSKAFEN
TPLRSLDLSLNPGLDMQKGSLYGLEDSLAHLLLKESNVSSLNTELSSLRSLRHVDLSTNQ
LDSLPLLNKESPIESLNLQNNNLVTLDQNTMVDLERSLKTLYMGSNPLSCCENLGVLHIV
RHSTVTVPDIEMVTCSHQDHSEPVNIGMVTQEMCSGPDVPNYTTVVVVTVVTLILLLGLL
VKCCHLRRQKHSRSFSA
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggcaggagtcggctgaggggagcgtcgcggtccgcgcgtgggggggcgaggat
gtgaagacgggaggcgtggtcaggatgaggcgccacctgaacgtcagcaccatggccgct
ctccagctgctcttcctgccgttggtcggctgcatggcggcgtctgcgcatcccccagga
cgcctgcccccatgccaagttgtccagatggacgtgttctgcagcaatctgagactccga
ggtgttcccgtcaaccttcctcgtggagtccaaacgctggacctctcactgaaccaggtt
cagaacctcagccgggagactctgggcttccacaccggtttccatcgactgaatctacac
gccaacaagatccacttcatccagccgggcctcttcaaagacatgccggacctgaaggtc
ttagacctctccaggaaccatctcaacgtctttgcagtttccaaagtaaacgtcggacct
ctttccgctctgaagtctctggatctttcagggaacgggttctacacgggaatgtcggac
tatttcctggccgactccccgtcactggaaagtgtttctctgagcgacaacagcatcaca
aaagtaacacaagacaccttcaaggggtcgctgtccctgaagaaaatcagcctccacaat
aacgtcatcctggagatcgaagacggagcctttgactctctgcagaacctgaccgagctg
gacctgtccaagaactccatcacctgcatcaaggacttcaatctgcacagcctggaggtt
ctgaacctgtccaagaacagtctggaggattttcagagcacaactgcaaaactcgacttt
aaactcgtctctcttgatctgagcgaaaacaaattactttacttccctctccttcctaag
aataatgtcctggagcacctggacatttcccggaaccacatccagacggtcacagaaagt
tcagagaagacctacctggtctttgagaagctgagatacctggacatgagctacaacaac
ctgaaagacgtaccggaggatttttttaaatgcatgggttccctggaggtcctgaacgtg
agccataactgcatcagctcgttttccatcaccgaaggacacgtgctgcagaaggtgaag
gtgatcaacctgagctataactctctgcagactctacgtttgaagaaagacgcactgctc
tacctgagaaagctgtacctgcaaggaaatgacctcaaacagctggaccagcagatattt
cagagcctcccaaacatccgacacctgcagctccaggagaacaacctgagagtctgctcc
tcggaggagaaccagcaggatcctcctggttgtgtgttttttcactccattgcgagtctg
cgcttcctgaacatctctgaaaacaacctgaggactttgccctcaaaggccttcgagaac
acccctctgaggtccttggacttgtctctgaaccccggcttggacatgcagaaaggctcc
ctctacggtctggaagactccctggctcatcttcttctgaaggaaagcaacgtgtccagc
ctgaacacggagctgtcctctctgaggagcctcagacacgtcgacctgtccaccaaccag
ctggacagcctgccgctgttaaacaaggagtctcccatcgagtccctcaacctacagaac
aacaacctggtcaccctggaccagaacaccatggtggacctggagcgctctctaaagacc
ctctacatgggctccaaccctctgagctgctgcgagaaccttggcgtcctgcacatcgtg
aggcactccacggtcaccgtccccgacatagaaatggtcacctgcagccaccaggaccat
tcggagcccgtcaacatcgggatggtgacccaggagatgtgcagtggacccgacgttcca
aactacaccaccgtcgtcgtggttacggtggtgactctgatccttctgttggggctgctg
gtgaaatgctgccatttaaggagacaaaagcacagcagaagcttcagcgcgtga
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