Oryzias melastigma (Indian medaka): 112141137
Help
Entry
112141137 CDS
T07439
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta isoform X2
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112141137
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112141137
Enzymes [BR:
oml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
112141137
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
112141137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
Fn3_Dep-1_4th
PTP_tm
Ig_ILCR1
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Glyco_hydro_66
Tc-R-P
PTP-SAK
DSPc
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
112141137
NCBI-ProteinID:
XP_024119960
LinkDB
All DBs
Position
LG6:7887616..7920574
Genome browser
AA seq
2552 aa
AA seq
DB search
MEALSLVLDLVLLLGPSYLYTSSVPRSPHSTNTPVELSSNNDIYTSSSYKTGPTEPLTGT
EEPYRTLQEIISSSAHSSAAKEAKEYTNPNKPPDLRTNVSFSVTPLSGVNSNQTDLSNSP
ELTASQAPVSDGRGMELQSASSSVQTEVFSRPFLIKNQTELRPSRFTSASHSTADPHVTG
DKSASTELTHVSATTKSQSMTKSTTAMESSTPPFTVPAAAHLTSASITQSHSIPTESRGP
VSQDSLSATGSTHHSKTFVSTKTGVTTLFDINEMSAATTLLTKFVTTPATNPESTPVTTP
ATNPASTPVKTLPTNPVSTPVTTPPTNPASTPVTTPPTNPASTPVATPPTNSASTPVTTP
PTNPASTPVTSLTEPSSTPVTTPPTNPASTPVTSLTEPSSTPVTTPPTNSASTPVTTPAT
NPASTPVTTSLTEPSSTPVTTPVTKPKTTPVTKTVTEAVITSGTRPVKTPVTPPATGPET
IPDTTPVDTATTTPVTIPAPLNSSMSVYTSIPVNTPTNLLVSTTTPTNLITDLVKPETNS
ATKYVSTAKTLPGMTSMKTLATKSMATSVTTPGEKPVTKTITVPGITLETEPMTIPLTTP
VTKPVTSPMYDLRTTPMTKATTKDVTTPVTYVEKLTTTPETTRLTTLRTVSKHLTTPVTV
LTTRAASATTVTPKRTPTITYGDVQQGVKTSTPASPFRTSVATSKTSAFTPSTPSLATTP
STTRKPITGTAQVRTTIGTILQPPLSTSTVPASLQVHTSMGPRCAPHVAEITSSSDSAVL
LLTSTSVSCEFTATINSSSPPGIFHCELHGENSSLFICHINNLEPGTLYQLTVTSRKDGG
QSNTFMWTAPSAAVHLQAASTSTEKIRASWQAGPGRLENFRVLLTDWNGVPLQSLTVKNT
TTSVDFEGLQPGTQYTVTVVAEAAGLQSSTSTDAITVPGLPSTFSMSINSRTVRLSWEPP
RGNFDNYCALVLDGTTVLLNQTVSKLSSELVISAATLGLVPGRLYTAELTVHYGILGNTT
RCSSRLEPQPVEKLHIRHADETSLSVQWIPPIGQWDGFVVILKEDLSTAVSQRTLRVDAR
DCTFNSLTPGRRHTVTVVTRSGNLSSLASVMAWTTPARVGHIQVFSLGSTNSLQTLWEPA
SGDLDWYQVLLVHDSSVIKNESVGVNTSSVVFQELKPGALYKVVVTTVRAGLTSRQAVGE
GRTAPAAITDVRVSNNGRTDFLTVSWGQAPGEVDSYLVTLADPDRTLHTVAVSKSNPSCV
FNSLVPGRLYNISITSCSGRYQNSTIIQERTQPAKVQSPTATHGARDDYLKVYWRHAAGD
LDRYQVFIKHNNTLLQNKTLPKVQSECVFMGLAPGRLYTVLVNTWSGAYEASASTYGRTL
PAPVRSLALTGSGTKELRVSWLPAEGDVDHYEVQLLYSDMKVFPPVTLGSNVRVCVLTSL
TPGRLYKILVSTFSGPNQRAHFIEGRTVPSKVKNIHVSNEGGSSSLKVSWTPGQGDVDGY
SVFLYQGGRELSVRAVLKRQNELTFDSLQPGQLYSIVVQSVSGQLLNNYTTTGRTVPLSV
TGLQVDPLQSTCSLQVSWQEALGIADGYILQVLDDRGSLVTNASQLFGLTRHRFDGLEPG
KNYQLLVQTTSGGINSQGVSIKARTWPAAITSLSIKTSTTTSLSFHWSPPEGDFQFYEIF
LYKSDNSLQESRRLQSSSQQCSFQGLRPGAPYRMVIVIHSGTQTNQTSTWARTVPAAVVS
LKASSGNQSDRLWVTWDHGGGDVSGYLLSLYNPDGSKQADHQLGSDSTEFVLSGLVPGRQ
YQAEVLSLSGELHNRASTNGRTAPKPPTSFLFGGVTNTSLEITWTGPVDSDYDDFDLQWN
PHDQLSVTNPYHSRTSGSRILTGLFPGRLYSFSLRTVSGATQPGATATRSTPIYNSIRTR
PGRVIGLHCRPQSSTSISCSWTPPEADYDSYNIECVHQDSRTLVYSRRTGRDSTSYVITQ
LEPHRRYTVSVKVISAGATSREAEDSVVTMIDRPPALPIGTRVSERSTVVTTCSILFWFN
CSWFSDTNGAIKFFTVVVTESNGVEDSLPDQYHPLPSYRDYISNSSIKSYQTSYFSSYCS
ESLDSNAHVFNISLGSGMEPLGGPCEPSSDLNQFCDGPLKPRTSYRLSIRAFTQLFHEDS
MDISTFSPLFTDTYLSLPIVTETESLNGVIGGISAGLFLVAVVVVITALLVCRRRVDRVG
EERPVLGMSQRRDRMSTGTQLGIKGSRRTFSPIRIMNFESHFNKLQADSNYLLSEEYEDL
KDVGRNQPLDSALLPENRGKNRYNNILPYDSTRVKLSYVDDDPCSDYINASYIPGNNFRR
EYIATQGPLPGTKDDFWKMVWEQNVHNVVMVTQCVEKGRVKCDHYWPFDQDPLYYGDLIV
QMLSESVLPEWTIREFRICSEEQLSFSRLVRQFHYTVWPDHGTPDNTQSLIQFVRTVRDY
VNRSPGSGPTVVHCSAGVGRSGTFIVLDRVLQQLDVRDTVDIYGAVFDLRLHRSHMVQTE
GQYSYLHHCVRDVLRARKLRNEQDCHHAPLRI
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atggaggccctgtctctggttctagatttggttctgctgcttggaccatcttatctgtac
acatcctccgttcccagatcacctcactctactaatacaccggtggagctctccagcaac
aatgatatctataccagttcttcttataaaacaggccctactgaacctttaacaggcaca
gaagaaccctacagaaccctccaagagatcatcagttccagtgctcacagctcagcagct
aaagaagccaaagagtatacaaaccccaacaaacctcctgatttacggaccaacgtttct
ttctcagttactccactttcaggtgtaaacagcaatcagactgatttatcgaattcccct
gagctcacggccagtcaagcacctgtgtcagacggaagaggcatggaactccagagtgca
tcaagttcagtacagacagaagtgtttagcaggccttttttgatcaaaaaccagactgag
cttagaccaagtagattcaccagcgccagccattctacagcagatccacatgtgacaggt
gacaaatcagcctccacagagctgacccatgtctcagctacgactaaatcacagtctatg
actaaatcaacgactgccatggagagctcaactccacccttcactgtacccgctgcagca
cacctgacatctgcttctatcacacaatcgcattctatccccacagagagtcgtggtcca
gtatcccaagattcactatcagccacaggctccacccaccattcaaagacatttgtgagc
acgaaaacaggcgtaaccacactttttgacataaatgaaatgtcagctgcgacaacactg
ttgaccaaatttgtgacaacacctgcaaccaatcctgaaagcacacctgtgacaacacct
gcaaccaatcctgcaagcacacctgtgaaaacacttccaacaaatcctgtaagcacacct
gtgacaacacctccaacaaatcctgcaagcacacctgtgacaacacctccaacaaatcct
gcaagcacacctgtggcaacacctccaaccaattctgcaagcacacctgtgacaacacct
ccaaccaatcctgcaagcacacctgtgacatctttgactgaaccctcaagcacacctgtg
acaacacctccaacaaatcctgcaagcacacctgtgacatctttgactgaaccctcaagc
acacctgtgacaacacctccaaccaattctgcaagcacacctgtgacaacacctgcaacc
aatcctgcaagcacacctgtgacaacatctttgactgaaccctcaagcacacctgtgaca
acacctgtgaccaaacctaaaaccacacctgtgacaaaaactgtaactgaagctgtgatc
acatctggaaccagacctgtcaagacacctgttaccccacctgcaactggacctgagacc
ataccagacacaacacctgtagacactgctacaaccacacctgtgaccatacctgctcct
ttgaactcaagtatgtctgtatatacgagcatacctgtaaatactcctacgaacttactt
gtgtccacaactacacctacaaatctgatcacagatttggtaaaacctgagaccaattct
gcaacaaaatatgtgagcacagcaaagaccctacctggtatgacatccatgaaaacactt
gcaaccaagtcaatggctacatctgtgacaacacctggggagaaacctgtaaccaaaact
ataacagtacctgggataacactggagactgaacctatgacaatacctcttactacacct
gtaaccaaacctgtgacttcacctatgtacgatctaagaaccactcctatgaccaaagca
acaacaaaagatgtgaccacacctgtgacatatgtggagaaactgacaacgacacccgag
accactcgtttaactacacttagaactgtgtcaaaacatttaaccacacctgtgaccgtt
ctgaccacacgtgcagcatctgcaacaactgtcacacctaaaagaactcctacaatcaca
tatggagatgttcaacagggtgtaaaaacatctacacctgcttcaccatttcgtacctct
gtggccacaagtaagacctctgcttttacaccttcaactccatctttggccactacccct
tctacaaccagaaaacccatcacaggaaccgcccaggtaaggactaccatcggcacaatc
ctccagcctcctttgagtacaagtacagttccagcctctctgcaggttcacacatcaatg
ggacccagatgtgctccacatgtagcagagatcacctccagttcagactcagcagttctc
ctgttgaccagcaccagcgtatcgtgtgaattcacagccaccatcaactcatcttccccg
cctggcatctttcactgtgagctgcatggggaaaacagcagcttgttcatctgccacatc
aacaacttggaaccaggaaccctctaccagctgactgtgacctccaggaaagatggaggc
caaagcaacaccttcatgtggacagctccctctgctgcagtccacctgcaggcagcctcc
acctcaactgagaaaatcagggcatcttggcaggctggtcctggacggttggagaacttt
agagttctgctgacggactggaacggagttcctctgcaaagcctcactgtgaagaatacc
accacgtctgttgactttgagggtttacagccgggtactcagtacaccgtcaccgtggta
gcagaggctgctggcctgcagagctccacctccactgacgctatcacagtgccaggcctg
ccatccactttctccatgtccatcaacagccggactgtgcgactcagctgggaacccccc
agaggaaactttgacaactactgcgccctggtactagacggcaccaccgttcttctgaac
cagactgtcagtaagctgagcagcgagcttgtcatatcggctgctactcttggcctggtg
cctggacgcctttacacggcagagctcaccgtgcactatggcattctgggtaacacaaca
cgctgcagcagcagattggaacctcagcctgtggagaagctgcacatccgccacgctgac
gaaacatctttgagtgtccagtggattcctcccattggacaatgggatggctttgtggtt
atcctcaaagaggacctctccactgctgtgtctcagaggaccctcagggtggatgccaga
gattgtaccttcaacagcctcactccaggacgccgtcacactgtcactgtggtaaccaga
agcggcaacttgagcagcttagcttcggtgatggcgtggaccactcccgctcgggttggt
cacatccaagtttttagtctaggcagcaccaacagtctgcagaccctgtgggaaccagcc
tctggagacctcgactggtatcaggttctgctggtccatgacagcagtgtcatcaagaat
gagagtgttggagtgaacaccagcagtgttgtcttccaagaactgaaaccaggagctctg
tacaaggttgtggtcacaacagtgagggccggactcacctccagacaagctgtgggagag
ggacgcacagcaccagctgcaatcacagacgtgcgggtcagtaacaatggccggacagac
ttcctgacggtgtcctggggccaggctccaggtgaggtagacagttacctggtgactctg
gcagacccggacaggacactccacactgtggctgtctccaaatccaaccccagttgcgtc
ttcaattcgctggttcctggaaggctttataacatttccatcaccagctgcagtgggcgt
taccaaaacagcaccatcatccaggagagaacccaaccagccaaggtgcaaagcccaaca
gcaacccacggtgctagagacgactacctgaaggtgtactggcgccatgctgccggagac
ctggaccggtaccaggtgttcatcaaacacaacaacaccctccttcagaataagacgttg
ccaaaagtgcagagtgagtgcgtgttcatgggcctggcacctggacgtctgtacacagtg
ctggtgaacacctggagtggggcgtatgaggccagtgcctccacctatggtcggaccttg
ccagcaccagtcagatctctggctctaacaggttcagggacaaaggagctccgggtttca
tggctgccggctgaaggtgacgtggatcactatgaggtacagctgctgtacagcgacatg
aaggtgtttccacctgtcactctgggaagcaacgtaagggtgtgtgtcctgacatcactc
acacccggacgactttacaagatcctggtgtctaccttcagcggtcccaaccagagggcc
cactttattgaaggccgtacagttcccagtaaggtgaagaacatccatgtcagtaatgaa
gggggcagcagcagcctgaaggtgagctggactccaggacagggcgacgtggacggctac
tctgtgtttctgtaccaaggaggccgagagctcagtgtgcgtgccgtcctcaaacggcaa
aatgagttgacctttgattcactgcagccgggtcagctgtacagcatcgtagttcagtct
gtgagcggacagcttctgaacaactacaccaccactggccgcacagtcccgctgtcagtc
acaggactgcaggtggatccccttcaaagcacctgcagcctccaagtgagctggcaggaa
gctctgggcattgcagatggatacatcctgcaggtcctagatgacagaggaagtctggtc
acaaatgcctcacagctctttggactcacacgtcacaggtttgatggccttgaaccaggg
aagaactaccaattgctggtccagaccaccagtggaggtatcaacagccaaggggtcagc
atcaaggctcgaacatggcctgccgccatcaccagcctgtccatcaaaaccagcaccacc
accagcctgtccttccactggtcgccaccagagggagactttcaattttacgagatcttc
ttgtataaaagcgacaactccctgcaggaaagtcggcgtttgcagtccagcagtcagcaa
tgttcctttcagggtctccgacccggggcgccttatcggatggtgattgtaatccacagc
ggcacgcagaccaaccagacctccacgtgggccaggacagtgccagcagcggtggtgtct
ctgaaggctagcagtgggaaccagtccgaccgtctgtgggtgacctgggatcatggtggt
ggggatgtgagcgggtacctgctgtctctctacaatcctgatggctccaagcaggctgac
catcagctgggctcagattccacagagtttgtcctctcgggcctcgtaccgggccgacag
taccaagctgaggttctgagtctgagcggagaactccacaaccgagccagcaccaatggc
cggacggctcctaaacctcccacatcctttttgtttgggggggtcactaacacctcactg
gagatcacctggactggtcctgtagactcagactatgatgactttgacctgcagtggaac
cctcatgaccagctgtctgtcaccaacccctaccacagcaggacatcgggcagtcgtatc
ctgacaggtctgttccctggacggctttacagcttcagccttcgtaccgtcagtggggcc
acacagccaggggccacggccacccgcagcacccccatctacaacagcatccgaaccagg
ccagggcgagtcatcggcctccattgccggccccaaagctccacctccatctcctgttcc
tggacccccccagaggcggattacgactcctacaacattgagtgtgttcatcaggactcc
cgcaccctggtctactctcggcgcaccggcagagactccaccagctatgtcattactcag
ctggagcctcacagacgctatacagtctctgtaaaggtcatctctgctggagccaccagc
agggaggcagaggacagcgtggtcaccatgatcgatcgtcctcccgcactccccattggt
acccgagtcagtgagaggtccactgttgttaccacctgctccatcttgttctggtttaac
tgcagctggttcagtgataccaacggtgctatcaagttcttcactgtggtggtgacagag
tctaacggtgtggaagattccctgcccgaccagtatcacccactaccttcttacagggac
tacatctccaacagctccatcaagtcctaccaaaccagttacttctccagctactgctca
gagagcctggatagcaatgctcatgtcttcaacatcagcctggggtcaggcatggaaccg
ctggggggcccttgtgagcccagcagtgacctaaaccagttctgtgatggaccactgaag
cccaggacttcctacaggctcagcatccgggctttcactcagctcttccatgaagactca
atggacatcagcaccttcagtcctctgttcaccgacacgtatctgtctctgcccattgtc
actgagactgaaagtctgaacggggtcattggaggcatcagcgctggactgttcctcgtt
gcagtggtcgtggttatcaccgctctgttggtttgcagacgcagggttgacagagtgggc
gaggaaaggccagttctcggcatgagtcagaggagggacagaatgagtacaggaacccag
ctgggtatcaaaggaagcagaagaacctttagtcccatcaggatcatgaactttgagtcc
cacttcaacaagctgcaagcagactccaactatcttctgtcagaagagtatgaggatctg
aaggatgttggtcggaatcagcctctggactcagctctgctgccagaaaaccgtgggaag
aaccggtacaataacatcctcccctatgattccaccagggtgaagctctcctatgtggac
gacgatccctgttcggactacatcaacgcaagctacatcccaggcaataattttcgccgg
gagtacatcgccacacagggtccactgccaggaactaaagatgatttctggaagatggtc
tgggaacagaatgtccacaacgtggtgatggtcacgcagtgtgtggagaaaggcagagta
aagtgtgaccactactggccctttgatcaggacccgctgtactacggagacctgattgtg
cagatgctttcagagtcggtgctgccagagtggacgatccgagagttcagaatctgcagc
gaggagcagctgagctttagccgtttggttcggcagtttcattacacggtgtggcccgat
cacggcactcctgacaacactcagtccctaatccagtttgtccgaacagtgcgggactat
gtcaacaggtcccctggttctggtcctactgtggtccactgcagtgctggagttggccgt
tcagggactttcattgtcttggatcgagtgctacagcagctggatgtcagggacacagtg
gacatctacggcgctgtctttgatctgcggctccaccgttcacacatggtgcagactgag
ggtcagtactcttacctgcatcactgtgttcgagatgtcctgagagcccgaaagctgcgc
aacgagcaggactgccaccatgctcccctgagaatataa
DBGET
integrated database retrieval system
