Oryzias melastigma (Indian medaka): 112141150
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Entry
112141150 CDS
T07439
Symbol
ppfibp2b
Name
(RefSeq) liprin-beta-2b isoform X1
KO
K27096
liprin-beta
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112141150 (ppfibp2b)
Membrane trafficking [BR:
oml04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112141150 (ppfibp2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
AAA_13
DUF16
WHEP-TRS
ADIP
DUF6825
LRRFIP
Motif
Other DBs
NCBI-GeneID:
112141150
NCBI-ProteinID:
XP_036068115
Ensembl:
ENSOMEG00000016418
LinkDB
All DBs
Position
LG6:7080361..7179395
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AA seq
1035 aa
AA seq
DB search
MLPAIAMETEASHMLEAALEQMDDIIAGSKAMEFSCNTCDLDSPVSAAPLQIVQLAEDLK
LALELQPDQERDHLRAQLPTETAQALIDWLQSGVVNFCSPANNETYQERLLRLEGDKESL
VLQVSVLTDQVEAQGEKIRDLESSLEEHRQKLASTEEMLQQELMSRTSLETQKLDLMDEV
SYLKLKLVSMEESHTNTHEADPPDTKQDKAECVVNFISELQEQMCRFQAEISTRIQEKKA
LEEKEAQQGDPRGHPAWGCGPHVGLAAPDPGLSGSDSWNQSGGQTVHDLIQEVKQLKNKV
DELEGQKNQYERKLRATKLSISYSLHVCYQSLMTQLSSLKLTVEHTQLEKQHWEERWRGA
QAEMSELQQLLASKDAEIECLQTQLLARDGSANDNAKRDQEYQRLKVGMESLLASNDEKD
RRIEELTVLLGQYRKMREVMALTQGSSEEELSGSLKLKAITHKAHSDMLRSEMSSRGSSP
LLLSSSPFQRELESSFQNSLDASLMSAGEMSFLNGSWHRRRLLSSSLEELQSGSLQKSPL
TELNKYQTLPGKLRKKSEARTELSCDRSTDAEYSSPVKLSPDHDKNFTLIRCRSASAPVL
GSPGKHDLYDTEPSDRLDMMSDHSPLSSGVDSGQQSPVSPENRKTHRGIRKLWGKIRRSQ
SGSPVQLHDQEGGDFKRGGFRATAGPRLARSGKTRDLKLPFSKWSVDQVCDWLEDIGLGQ
YGLFARRWVSSGQTLLSASPQDLEKELSLKHPLHRKKLQLAIKTLTGKQAERSAELDYIW
VTRWLDDIGLPQYKDQFNEGRVDGQMLQFLTVNDLLFLKVTSQLHHLSIKCAIHVLHVNK
FNPNCLKRRPGNESQFSPSEVVQWSNHRVMEWLRSVDLAEYAPNLRGSGVHGGLIMLEPR
FNADTLAMLLNISPQKTLLRRHLTTNFNNLVGEQAQQEKREYTEAPGYTPLSITAKVKPK
KLGFSNLTHLRRRRSDESTDYVCPIESPSSQSGQSAANGVQVRPYAGFRGLSPILDREPA
RDQVGLEEGKADTSP
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctgccatcgccatggagacggaggccagtcacatgctggaggctgcgctggag
cagatggatgacatcattgcaggttccaaagcgatggagttctcctgcaacacgtgtgat
ctggattctcccgtcagcgctgcgccgctgcagattgttcaattagctgaggacctgaag
ctggcgctggagcttcaacccgaccaggagcgggaccacctgagggctcagctgcccaca
gagactgcgcaggctctcatcgactggctgcagagcggagtggtgaacttctgttctccc
gccaacaatgaaacctaccaggagcgactgcttcgactagaaggagacaaggagtctctg
gtcctgcaggtgagcgtcctgaccgaccaggtggaggcgcagggggagaagatcagagac
ctagaaagttctttagaggagcaccgacagaaactggcctccactgaggagatgctgcaa
caggagctgatgagcaggacctccctggagactcagaagctggacctgatggatgaggtg
tcctacctcaaactgaagctggtcagcatggaggagtcgcacaccaacacacacgaggcg
gatccccccgacacaaagcaggacaaagcagagtgtgtggtaaacttcatcagcgagctc
caggagcagatgtgcaggtttcaggcggagataagcactcgcatccaggagaaaaaagcc
cttgaggagaaggaggcccagcagggggatcccagaggacacccggcgtgggggtgtggc
ccccacgtcgggctagccgcccccgatccgggcctgtcaggctcagattcctggaatcag
tcgggaggacagactgtgcacgatctgatacaggaagtgaagcagctgaagaacaaagtg
gatgaactggaggggcagaagaaccagtacgagaggaaactcagagccacgaagctctcc
atctcttactctctccatgtgtgttaccagtcgctcatgacccagctgtccagcctcaag
ctgactgtggagcacacacagctggagaagcagcactgggaggagcgctggcgcggcgca
caggcagaaatgtcggagctgcagcagctcctggcctccaaagatgcggagatcgagtgc
ctgcaaacgcagcttctggccagagatggcagcgccaacgacaacgccaaaagagatcag
gaataccagaggctgaaggtggggatggagtccttgttggcctccaatgatgaaaaggac
cggcgaatagaagaactgactgttctacttggccagtacagaaagatgagggaggttatg
gctctcactcagggaagcagcgaggaggagctaagtggcagcttgaagctcaaagccatc
acacacaaagcacactcggacatgctcagatcagagatgtcctcaagaggctcctccccc
ctcctgctgtcctcctccccctttcagagagaacttgagtcaagtttccagaactctttg
gacgcatcgctgatgtctgcgggtgaaatgagtttcctgaatggatcgtggcaccggcgc
agactgctctccagcagtcttgaggagctgcagagtggatcattacaaaagagcccgctg
acagagctgaacaagtaccagactcttccagggaagctgaggaaaaagagcgaagcgagg
actgagctgagctgtgacagaagtacagatgctgagtactcgtctcctgtcaagctctct
cccgaccatgacaagaacttcactctcattcgctgcaggagtgccagcgctccggttcta
ggatctccaggaaaacacgacctttatgacactgagccctcagataggctggacatgatg
tctgaccactcccccctgtcctccggggtggactcgggccagcagtctccggtctcgccg
gagaacaggaagacccacagaggcatccggaagctctgggggaagatccgccgcagtcag
tccggcagtcctgtgcagctccacgaccaagagggcggagattttaagagggggggcttc
agagctacagccggacccagactggcccgctcggggaaaacaagagatctcaagctgccg
ttttccaagtggagcgtggatcaggtgtgtgactggctggaggacatcgggctgggtcag
tacggcctgttcgctcggcggtgggtcagcagcgggcagacgctgctctcggccagcccc
caggacctggagaaggagctgtcgctgaaacacccgctccacaggaagaagctccagctg
gccatcaagacgctcacggggaagcaggcggagaggtcggcggagctggactacatctgg
gtcacacggtggctggacgacatcggccttcctcagtacaaagaccagttcaatgaagga
cgggtggacggacagatgctgcagttcctcacggtgaatgacttgctgttcctgaaagtg
acgagccagctgcaccacctcagcatcaagtgtgccattcacgtcctccacgtcaacaaa
ttcaaccctaactgcctgaaacgcaggcccggcaatgagagccagttttctcccagcgag
gtggtccagtggtccaaccaccgagtcatggagtggctgagatccgtggacctggcagag
tacgctcccaacctgcggggcagcggcgtgcacggaggcctgattatgctggagcctcgc
tttaacgccgacacgctggccatgctgctgaacatttcccctcagaagacgctgctgcgg
cgccacctcaccaccaacttcaacaacctggtgggggagcaggcccagcaggagaagagg
gagtacaccgaagcgcccgggtacactcccctgagcatcaccgccaaagtcaagccgaaa
aagttgggcttctccaacctgacgcacctgaggaggcggcggtcggacgagtccacagat
tacgtctgccccattgagtcaccctcgtctcagtcaggacagtccgcggccaacggcgtg
caagtgcggccatacgccggcttcagaggcctgagccccatcctggaccgggagcccgcc
agggaccaggtggggctcgaggaaggcaaagctgacacatcgccatga
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integrated database retrieval system
