Oryzias melastigma (Indian medaka): 112141153
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Entry
112141153 CDS
T07439
Symbol
smpd3
Name
(RefSeq) sphingomyelin phosphodiesterase 3
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00600
Sphingolipid metabolism
oml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
112141153 (smpd3)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
112141153 (smpd3)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
112141153
NCBI-ProteinID:
XP_024119992
Ensembl:
ENSOMEG00000014995
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Position
LG6:complement(8015744..8049970)
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AA seq
711 aa
AA seq
DB search
MVLYSTPYSSTCLHFLDGLSWSLVFPCYWLLDRLLASCVPTSLEKRQRSQDPCSFLTLCV
LISVPLYLLLFLASLPFALLGFIIWAPLQAVRQPYLYTYRRPDKSEQCQAGPGGAGTGEW
RPQGRSFCFCSANVCLLPDSLARFNNLSNTHRRALEVGKRIRNGASRPQIKIYIDSPTNT
SISAASFSSLATGFRRTSSLDQRPDQTHTTNGPAETEVEPMTECPVHPPGVTDCPAHPSS
GVQGSGECPVHHDDAPADCPLHSTNNSSDCPVHTSGEAADCPMHSSGAQHDCHMREEEKQ
HRASVDCPLHTSGVQISISAPEPDPQEEDTAETGNHREAGGDTGSMTASRESLARYHACD
GGIGISSNNTLSHVPRTSIFKRPGRKRRHGDETFDHEVSAFFPANLDFMALQEVFDHGAT
SRLRRQLHRYFPYVLSDVGRYGWRGCCSRFKFLNSGLLLASRYPILDARFECYPNGRGED
ALAAKGALFAKVHVGTSHQEQRVVGYITCTHLHAIEGDAAVRCEQLDLLLQWGAEFRQSS
CQSPEGEKVLEDLVAFDVILGDLNFDNCSSEDKLEQQHALFTQYKDPCRLGPGEDKPWAL
GTLLDPSGLYDEDASSPESLQKVMENEDGRKEYLVFPPSKNQCPGGSQKGRKIPLKGNGR
RIDYILYSDEGLQPDWKLDIEEFSFVTQLAGLTDHLSVAARLAVSTGEEEP
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggttctctacagcaccccctactccagcacctgcctgcacttcctggacggtctgtcc
tggagcctggtgttcccctgctactggctgctggaccgcctgctggcgtcctgcgtgccc
acctccctggagaaacgccagcgctcccaggacccctgctccttcctcaccctctgtgtc
ctgatctctgtgcccctttacctgctgctgttcctcgcctccctgcccttcgccctgctg
ggcttcatcatctgggcccccctgcaggcggtccgccaaccatacctgtacacctaccgc
agaccagacaagtctgagcaatgccaggctggaccagggggggcagggactggagaatgg
agaccccagggccgaagcttctgcttctgcagtgccaacgtgtgcctcctacccgactcc
ctggcccgattcaacaacctgtcgaacacccacaggagagccctggaggtggggaagagg
atccgtaacggtgccagtcgaccccagatcaaaatctacatcgattcaccaaccaacact
tccatcagtgctgcatccttcagcagtcttgccacaggttttcggcgcacctcgtcactg
gaccagcgtccagaccaaacacacaccaccaacggcccagctgaaacggaagtggaaccc
atgacagagtgtccggtccaccccccaggagtcacagactgtcccgcacacccgtcctca
ggagtccagggctctggtgaatgccccgttcaccacgatgacgccccagcggactgcccc
ctccactcaaccaacaacagctcagactgtcccgttcacacctcaggtgaggctgcagac
tgccccatgcactcctccggggctcaacacgactgccacatgcgtgaggaagagaagcag
cacagagcctccgtagactgccctcttcacacttcaggggttcagatcagcatcagcgct
ccagagccagacccccaggaggaggacacagcggagaccgggaatcaccgggaggcaggg
ggggacacgggcagcatgactgcctctcgggagtccctggctcgataccacgcttgtgac
gggggcatcgggatatcctccaataacacgctctctcatgtcccgcgcacgtcaatcttc
aagcgtccaggacggaaacgccgccacggagatgagacattcgaccatgaggtctctgcc
ttctttcccgccaacctggatttcatggcgctccaggaagtctttgatcacggagcaacg
tccaggttgcgtcggcagttgcacagatacttcccgtacgtgctgagcgacgtggggagg
tacggctggaggggctgttgctccaggttcaagttcttgaacagtggacttttgctggcc
agtcgctaccccatcctggacgcccggtttgagtgctaccccaatgggaggggtgaagat
gctctggccgccaaaggagcgctgtttgctaaggtccacgtgggcacttctcatcaggag
cagagggttgtgggatacatcacgtgcacacacctccacgccatagaaggcgatgctgca
gtccgctgtgagcagctagacctcctgctccagtggggggcggagtttcgccagtcctcc
tgtcagtcacctgagggggagaaggttctggaagacctggtggcctttgatgtcatctta
ggagacctgaacttcgacaactgctcttcagaggacaagctggagcagcagcacgctctc
ttcacgcagtacaaggacccatgccgcctcgggccaggagaggacaaaccctgggctctg
ggtaccctgctggaccccagcggcctttatgacgaagacgccagctcacctgaaagttta
caaaaagtgatggagaatgaagacggcaggaaggagtatctggtgtttcctcccagtaag
aaccagtgtcctggcggcagtcagaagggcaggaagatcccgctgaagggaaacggacgc
aggatcgactacatcctgtacagcgacgagggccttcagccggactggaagctggacatc
gaggagttcagcttcgtcacccagctggccggcctcaccgaccacctgtctgtggccgcg
cggctggctgtttccacgggggaggaggagccttag
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