Oryzias melastigma (Indian medaka): 112141154
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Entry
112141154 CDS
T07439
Symbol
arntl1a
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like 1a
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112141154 (arntl1a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
112141154 (arntl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
bHLH_HIF1A
Motif
Other DBs
NCBI-GeneID:
112141154
NCBI-ProteinID:
XP_024119993
Ensembl:
ENSOMEG00000016170
UniProt:
A0A3B3C9Y8
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All DBs
Position
LG6:complement(7041909..7069736)
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AA seq
639 aa
AA seq
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MEGDDFNTEDMINICDDLMADQRMDISSTITDFMSPGSTDLISSSISTPGMDYTRKRKGS
TTDYQIDGFSFDSDMDPEKDKMGSDQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP
TCNAMSRKLDKLTVLRMAVQHMKTLRGAANPYTEANYKPSFLSDDELKHLILRAADGFLF
VVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLI
DAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFC
TIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHPHIVPQPSPADIRVKPTEY
VSRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDINHLAECHRQVLQMREKIN
TNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVSCPMMEGSDYPQSAASPQS
MESVLISEGGGRRALPTVPGIPGGTRAGAGKIGRMIAEEVMEFQKIRGSSPSSCGSSPLN
KTSTPPPDSCSPGGKKIQNGGTPELPSTGIIPGPDSVGYPYSNQSIMSDNSHLSLDIMDE
PGSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagatgactttaacactgaggatatgataaacatctgtgatgacctgatggca
gaccagcggatggacatctcgtctacgatcactgacttcatgtctccaggctctactgac
ctcatctccagctccatcagcacgcctggcatggactacacccgcaagaggaaaggcagc
accaccgactaccaaatcgatggcttctcatttgacagtgacatggacccagagaaggat
aaaatggggagtgaccagcagggcaggattaaaaatgccagagaagctcacagtcagatc
gagaagcggcgcagggataagatgaacagcttcatcgatgagctggcgtcgctggtgcca
acatgcaacgccatgtcccgcaagctggacaagctgaccgtgctgcgcatggcggtgcag
cacatgaagacgctcagaggtgcagcaaacccctacacagaagcaaactacaagccttcc
ttcctgtcagacgatgagctgaagcatttgatactacgggcggcggatggcttcctgttt
gtggtgggctgcgatcgcggaaagatcctcttcgtttctgaatcggtgttcaagatcctc
aactacagccagaacgacctgataggtcagagcctgtttgactaccttcatcccaaggac
atcgccaaagtcaaagagcagctgtcctcctcagatacggccccccgagagaggctcatc
gacgctaaaactggacttcctgtgaagacagacatcaccccgggtccgtctcgactgtgc
tctggagccagacgctcctttttctgcagaatgaagtgcaaccggccgtcggtcaaagtg
gaggacaaagacttcccctccacctgctccaagaaaaaagctgaccgtaagagcttctgc
accatccacagcacgggctacctcaagagctggccgcccacaaagatggggctggacgag
gacaacgagcccgacaacgagggctgcaacctcagctgcctggtggccatcggccgcctt
cacccccacatcgtcccccagccaagccccgcggacattcgggtgaagcccaccgagtac
gtctcgcggcacgccatcgacgggaagttcgtcttcgtggaccagagagccacagccatc
ctggcttacctgcctcaggagctgcttggaacctccttctacgagtacttccaccaggac
gacatcaaccacctggccgagtgtcacagacaagtgctgcagatgagggagaagatcaac
accaactgttacaagttcaaaatcaaagacggctccttcatcacgttgaggagcagatgg
ttcagcttcatgaacccctggaccaaggaggtggagtacatcgtctccaccaacaccgtt
gtttcgtgtccgatgatggaggggtccgactaccctcagtctgctgcctctccacagagc
atggagagcgtcctgatctcagaaggtgggggtcggagggcgctgccaaccgtgcctggc
attcccgggggaacgagggcaggagccgggaagatcggccgcatgatagcggaggaagtg
atggagttccaaaagattcgaggctcgtccccgtctagctgtggctccagccctctgaat
aagaccagcacccctcctcctgactcctgctccccggggggcaagaagatccagaacggc
ggtacccctgagctgccgagcacagggatcattcctggaccggattctgttggctacccg
tactccaaccaatccatcatgagtgacaactcccacctgagcttggacatcatggacgag
cccggctccagcagccccagcaacgacgaggcggccatggcggtcatcatgtccctgctg
gaggcggacgccggcctggggggccccgtggacttcagcgacctgccctggcctttgtga
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