Oryzias melastigma (Indian medaka): 112141275
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Entry
112141275 CDS
T07439
Symbol
snrpd2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112141275 (snrpd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112141275 (snrpd2)
03032 DNA replication proteins [BR:
oml03032
]
112141275 (snrpd2)
Spliceosome [BR:
oml03041
]
Complex A
U1 snRNP components
Sm proteins
112141275 (snrpd2)
U2 snRNP components
112141275 (snrpd2)
Complex B
U1 snRNP components
112141275 (snrpd2)
U4/U6.U5 tri-snRNP components
112141275 (snrpd2)
Complex C
U2 snRNP components
112141275 (snrpd2)
DNA replication proteins [BR:
oml03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
112141275 (snrpd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Motif
Other DBs
NCBI-GeneID:
112141275
NCBI-ProteinID:
XP_024120159
Ensembl:
ENSOMEG00000012661
LinkDB
All DBs
Position
LG13:complement(28567987..28571993)
Genome browser
AA seq
118 aa
AA seq
DB search
MSLLTKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLISGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttctaacaaaacccaagtctgagatgactcctgaggagctccagaaacgagag
gaggaggagttcaacacaggccctctgtcggtgctcactcagtcagtcaagaacaacacc
caggtcctcattaactgtcgcaacaacaagaagctgctgggaagagtcaaagcattcgac
aggcattgtaacatggtcctggaaaacgtgaaggagatgtggacagaagtccccaaaagc
gggaagggaaagaagaagtcgaagccggtcaataaagatcgctacatttccaaaatgttc
ctcaggggggattctgttatcgttgtcctcagaaatcctctgatttctggaaaatga
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