Oryzias melastigma (Indian medaka): 112141472
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Entry
112141472 CDS
T07439
Symbol
lrit3a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3a isoform X1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112141472 (lrit3a)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112141472 (lrit3a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
LRR_1
Ig_2
LRR_5
ig
fn3
LRR_14
C2-set_2
LRR_9
Motif
Other DBs
NCBI-GeneID:
112141472
NCBI-ProteinID:
XP_036069700
Ensembl:
ENSOMEG00000008052
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All DBs
Position
LG10:9012675..9018531
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AA seq
621 aa
AA seq
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MMETREGRGPIRPQGESPLTLSTCFLFRSVLCNDPDMSDIPVNVPVDTIKLRIEKTAVRR
IPTEAFYYLVELRYLWITYNSITSVDTGSFYNLKVLHELRLDGNMVSVFPWESLKEMPRL
KTLDLHNNRLTTVPTEAIPYLLNITYLDLSSNKLATLPSDLMDIWPPFNGEPVSSNASQK
VVLGLQDNPWFCDCKISKLIEISKMADTPVVLMDLFLTCAAPESLAGVLFQRAELDNCVK
PSVMTSATKITSPLGSNVLFRCDATGSPTPTLHWIKSDGSAINNTVQESPGEGIRWSIMS
LHGIENKEAGNYSCKAKNVAGTAEATISLSVAGTISTTIPPPKPGIASGLGTTVTPPTAV
SSLALTTAFPRSSTALSGVQKSPRTTPSSGLRDSLKQTKTQQGGNGRKLAADEKSNKSDA
SQSFKDLEIVEETADSAVLLWTAGGVQGDAPLTVVYSPYGEDDSKRTVETKAGTGKLLLD
GLSPGMRYSVCLVAKVNPAAKDPCIDFYTLDDADSEGQNQLFFIISGIACAVALPLIALL
VYKILALYCKGGTTDLDAEELEKDSYVKFETISMKQRTLNSHPSELWARRPTNESERLLL
CSRSSIDSQMTYDSSRSEYLC
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacacgagagggcagaggtccaatcagacctcagggggagtcacccttaacc
ctatctacatgtttccttttcaggtctgtgctctgcaatgacccggacatgtcggacatc
cccgtcaacgttcctgtggataccatcaaactccgcatagagaaaactgcagtgcggcga
atcccaacagaggccttctactacctggtggagttacggtacctttggattacctacaac
tcaataacctcagtggatactggaagtttctacaacttgaaagtgctgcatgagttgagg
ctggatgggaatatggtgtctgttttcccttgggagtctctaaaagagatgccaagactg
aaaacgttggaccttcacaacaacaggctcaccacagttcctactgaggccatcccctac
cttctcaacatcacttacttggatctgtccagcaacaagttagcaaccctaccatctgat
ctcatggacatctggccgccgttcaatggagaaccagtgtcttctaatgcttctcagaaa
gtcgtgttaggcctccaggacaacccctggttctgtgactgtaaaatctcaaagctgata
gagatctccaaaatggcagacaccccggtagttctgatggacctgttcctgacctgcgct
gcaccagagagcctggcaggagttctgtttcagcgtgctgagctggataattgtgtgaaa
ccatcagtgatgacatctgcaaccaagatcacgtctcctttgggtagcaatgttctcttt
cggtgtgacgccacaggatctccaacacccaccctccattggatcaagtctgatggttca
gcgatcaataacacggttcaagaatctcctggggaaggaatccggtggtccatcatgagc
ttgcatggaatcgagaacaaagaggcagggaactacagctgcaaagccaagaatgtggcg
ggcaccgcagaggccaccatctctctgtctgttgctgggaccatcagcaccaccatccca
cccccaaagccgggcattgcatctggacttggtaccacagtcacccctccaacagctgtt
tccagcttagcactcaccacggccttcccgagatcatcaacagctctctctggggtccag
aagagccccagaaccacccccagctctggtctgagagactctttgaaacagaccaaaacc
cagcaggggggcaacgggagaaaacttgctgcagatgagaagagcaacaaaagtgatgcc
tcacagtctttcaaagacctggagatcgtggaagagacagctgacagtgccgtgctgctc
tggactgcgggtggagtacaaggcgatgcccccctgaccgttgtgtattcaccctacggt
gaggatgactccaaaaggacagtggagactaaagcagggactggaaaattgctcctggat
ggtctgtctcctgggatgaggtactccgtatgtctcgtagcaaaagttaaccctgcggcg
aaggatccttgcattgacttctacactctggacgatgcagacagtgaaggccagaaccag
ctgttcttcatcatcagcggcattgcctgtgctgtggccctgcctctcatcgctctgctg
gtctacaagattctggctctctattgcaaaggaggcaccacagatctagatgcagaggag
ctggaaaaagacagttatgtcaagtttgagaccatttcaatgaaacaaagaactctgaac
tctcacccatccgagctctgggcaaggagaccgacgaacgagtcggagcggctgctgctg
tgctcccggtccagcatcgactcacagatgacttacgacagttcccgctccgagtatctc
tgttga
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