KEGG   Oryzias melastigma (Indian medaka): 112141473
Entry
112141473         CDS       T07439                                 
Symbol
rnf4
Name
(RefSeq) RING finger protein 4 isoform X1
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oml04121]
    112141473 (rnf4)
Enzymes [BR:oml01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112141473 (rnf4)
Ubiquitin system [BR:oml04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112141473 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-C3HC4_3 Prok-RING_4 zf-RING_4 zf-rbx1 zf-C3HC4_4 Rtf2 zf_RING_Vps8 TRAF3_RING zf-RING_6 zf-RING_10 IBR_1 IBR zf-UDP zf-RING_11 zf-RING_16 zf-ANAPC11 zf-Nse
Other DBs
NCBI-GeneID: 112141473
NCBI-ProteinID: XP_024120375
Ensembl: ENSOMEG00000007726
LinkDB
Position
LG10:9390436..9394972
AA seq 214 aa
MSADPEGLAVCSSWTDMSSSTQRKRRATESPQVSRPGTKTSRAAQSRTAVSRRCHAGADS
APPAETIDVMDNTDDGVEEVVDLTCEGAEAAVVDLTNNNNNDSVLLVDEDPQGSRVPAGE
SYVLSSDEDEDTPPFSSAATSSVAHAFRSTPGMISCPVCLDLYSEIVGSGRLVVSTKCGH
VFCSQCLRDALTSSHTCPTCRNRLTSRQYHPLYV
NT seq 645 nt   +upstreamnt  +downstreamnt
atgtctgcggatcctgaaggtctggccgtctgcagctcgtggacggacatgagcagctct
acccagaggaagagaagggccacagaaagtcctcaagtttccaggcctggcaccaagacc
agcagagcagctcagtccaggacagcggtcagcaggaggtgtcatgctggggcagactcc
gccccccctgcagagaccattgacgtgatggacaacacagacgacggtgtggaggaggtg
gtggacctcacctgtgagggagcagaagctgctgtggtggacctgaccaacaacaacaac
aacgactctgtgctgctggtggatgaagatcctcagggcagcagagtccccgcaggtgag
agctacgtcctgagcagtgatgaagatgaggacacgccccctttcagtagcgccgctacc
tcctccgtcgcacacgcattcaggtcgacgccgggcatgatcagctgtccggtctgtctg
gatctgtactcagagatcgtcgggagcggccggttagtcgtttccacaaagtgtggtcac
gtcttctgcagccagtgtctgagagacgcgctgacctcctcgcacacctgccccacctgc
aggaatagactcacctcccgacagtaccaccccctctacgtctga

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