Oryzias melastigma (Indian medaka): 112141488
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Entry
112141488 CDS
T07439
Symbol
si:ch1073-157b13.1
Name
(RefSeq) 7SK snRNA methylphosphate capping enzyme
KO
K15190
7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112141488 (si:ch1073-157b13.1)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
112141488 (si:ch1073-157b13.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bin3
Methyltransf_25
Methyltransf_12
Methyltransf_31
Methyltransf_23
Methyltransf_11
PrmA
PCMT
MTS
Methyltransf_4
Methyltransf_32
tRNA_U5-meth_tr
CMAS
TRM5-TYW2_MTfase
Methyltransf_PK
DOT1
Methyltransf_15
RrnaAD
Methyltransf_18
FtsJ
Methyltransf_9
Ubie_methyltran
Spermine_synth
Motif
Other DBs
NCBI-GeneID:
112141488
NCBI-ProteinID:
XP_024120401
Ensembl:
ENSOMEG00000007393
LinkDB
All DBs
Position
LG18:137813..141867
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AA seq
585 aa
AA seq
DB search
MSLDQEPVPRPEVPVTLSPAFPAPISLSEQPQLTKNRPPVCSKNGLQASATIPPPPTATQ
RIGKRRFSMGISFRGVAKRRRRANSDSQAEPVLPSHFLLGGNIFDPLNLNSLLNEDVNRA
TNQETPKCSPVPSRSRDPVEILVPRDITDPLNLKGGSEEGGAAGVLLSPLKSRRKHRYKH
HGGGGASTDRDKSAMRLFPPTAGTSGVTARGGSVCASPLSCELNTAITCREDLAPSPRPS
RRHTHPPPGPAHKPGAHADCRHRRRRRTTSVHSDANHITVATTTCRFQTPLVEGAKAGRC
GGAQRGSAQPSERRKDKHRYQHGNHSRYYGYHGFYGGGYGRVGVEEDPRLRLLDADWFRD
KTVLDVGCGAGHMTLAIARKFNPSHILGVELDKHLVHAAKQNIRHFLSHDMVVERRSGEG
DGGGLLPFPLSFRVSRGPICGPSLLPSASSSRFPHNVTFIQGDYIAGREEWPGRGQFDVI
LCLGLTKWVHLQSGDEGVVRLFRRTYQSLSPGGMFILEPQPWSSYSRSKRATDSTFRRFR
SLRIRPEHFTSILTDSVGFCSYRLLTHTDNKRPVYLFHKGPSQRK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggaccaagaacccgttcctcgtcctgaggttcccgtaaccctaagccccgcc
ttccctgccccaatcagcctatcagagcagccccagctgacaaagaaccgcccccccgtc
tgctcaaaaaatggcctccaggcgtctgccacaatcccccctccccccacagccactcag
cggatcgggaaaaggcgcttctccatgggaatcagtttcaggggcgtggccaagcggcgg
cggcgtgccaacagcgacagccaggcggagcctgtgctgccgagtcacttcctgctgggc
gggaacatattcgacccactgaacctgaactctctgttgaacgaagacgtgaacagggcg
accaatcaggagactcccaagtgctcgccggtgccgtcccggagcagagacccggtggag
atcctggttcccagagacatcaccgacccgctcaacctgaaggggggcagtgaggagggg
ggggccgccggggtgctgctgtctcccctcaagtccagacgcaagcacaggtacaaacac
cacggagggggcggggcttccaccgaccgggacaagagcgccatgcgactgttccccccc
accgcggggacttcaggtgtgaccgccagaggaggcagcgtgtgcgcctcccccctgtcc
tgtgagctcaacaccgccatcacctgtcgagaagacctggcgccgtcgcccagaccctca
cggagacacacccacccccctccaggccccgcccacaaaccaggggcccatgctgactgt
cgccaccgcagacggcgccgcaccacgtccgtgcattcagacgcaaaccacatcaccgtg
gcgaccacgacctgcaggttccagaccccgctggtggaaggcgccaaagccggcaggtgt
ggaggagcccagcgtggctccgcccagccgtcagagaggagaaaggacaagcacaggtac
cagcacggcaaccacagccgttactatggttaccacggtttctacggcggcggctatgga
cgagtgggcgtggaggaggacccccgactccgcctgctggatgctgattggttcagggac
aagactgtgctggatgtgggctgcggcgccggtcacatgacactggccatcgctcgcaag
ttcaacccctcccacatcctgggggtggagctagacaagcatctggtccacgccgccaag
caaaacatcagacacttcctctcacatgacatggtggtggagcggcgctcgggggagggg
gacggcgggggcctgctccccttcccgctctccttcagggtcagtcgggggcccatctgt
ggcccctccctcctgccttcagcctcctcctccaggttcccccacaacgtcaccttcatt
cagggggactacatagcaggccgggaggagtggcctgggaggggccagtttgatgtcatc
ctgtgcctgggtctgactaagtgggtacacctgcagtcaggtgatgagggcgtggtcagg
ctgttcagacggacctatcagagcctgtcgcccggcggaatgttcatcctggagccgcag
ccgtggagcagctacagccgcagcaagagagccacggactccacgttccggcgtttccgg
agtctgaggatcagaccggaacacttcacctccatcctgacggacagcgtcggcttctgc
tcctacaggctgctcacacacacagataacaaacgacccgtctacctgtttcacaaaggc
ccctcccagcggaagtga
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