Oryzias melastigma (Indian medaka): 112141765
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Entry
112141765 CDS
T07439
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112141765 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112141765 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112141765 (ncor1)
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112141765 (ncor1)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
112141765 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
112141765
NCBI-ProteinID:
XP_024120705
Ensembl:
ENSOMEG00000010603
LinkDB
All DBs
Position
LG14:2681547..2807148
Genome browser
AA seq
2308 aa
AA seq
DB search
MSSSSGYPPTQGTFSSEQSRYPPHSVQYTLTGSRHTQEFAVQDYRTHMQDPQGRRRLSLL
SEFHPGIERPPERRHGYEPQFHSITAQPEHEALEAKRPRMEIVAEPHITRTPSTAGGLVL
PMTHSGQDSLRATVEVKKESQYIVKVESPSAGGPTLHMGEEQDTSPSKLSKEELIQSMDR
VDREIAKVEQQISKLKKKQQQLEEEAAKPVEPEKPATPPPVEHKHRSIVQIIYDENRKKA
EEAHKVLVNLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKI
CQRYDQLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLMDDP
MKVYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIATYLERKSVADCVLFYYLTKKNQNY
KTLVRRNYGRRRGRNQQITRPSQEDKTEDKNEEDKSEKVEKKEEEEKKDEEEKDEKEDSR
DIGKDKDKCDGGEDEDGKEQNAPRGRKTANSQGRRKGRITTRSMANEAASVAAEEAPPPA
LEPAVADPAQLSKSDPAQKGAKEANKPGTPVASVDTKAGAGETGETSRWTEEEMEVAKKG
LVEHGRNWIAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDSRRARSDRSQREGQ
AMASPDDDEDNADESEGGENSSDTESAPSPSQADSSKVADSKQVESTTADTLSTDSDKDL
TSNGKATEPPYGELRVKQEKSPEREMGSQEDKTRVVAFPGPLHPKTEPQDVDMKVGEVQV
KMEPEVKEKVEKGDHGERQRDLHSDNDSSATCSADEEVEAEPDRQRMYPMEKPMLRSPPG
SVLVPSPKQAHFSMQQMQHRAANIPPMVPGPYGPGGVSITGFAMFQHQIKAVHDSAHQEE
KQRQDLGDLERRPHYNTRSPTVMDRDVLHPSPNPLAQSMNEGVRVTFPRHNRPPNIPSPP
PLIPTTKPTDKPSFIQGGSISQGTPGTYLPSHAVYGPEGTKSSVGSISLGLPRQLDPHKP
GNAVSSLQDNRGSSAKGSEGLAFRGSITKGTPALPQSNVAADLLKGTITKLTPEDLSSPD
KTKGHVIYEGKSGHILSYDAIKNPRENTRSPRIGHELKRSHDMMESSMGRGHPGREGAPF
EGLISRALPREGLHGDSKERPLASGSIMHGTPRTATDSYDDAMKYGKQMRMESPPVRSFE
GSIGKGKPYEGVNTIKEMGRSIHEIPRQDQSAQDMCKTPELVDRRVMEGSIPQIHSLGQP
AIKHNVKSLITSPNKMPHTMPQLEAIDRAKYEESKAVRHTSVVNSTTSVLRSTHQEAGKA
QHSPSMYEDSSARRTPVNYSTNPVSRGSPMLRCPDGVMSSAKSAAHDRKSAMTPTQRDSV
PAKSPVSGGDPVASHSPFDPHHRPVVPGEVYRAHMLPHLDPSLAFHRGLDPAFMFPRQPS
PTGYHNTYQLYAMENTRQTILSDYITSQQMQVIPRPDMARGLSPREQAVAVPYPANARGN
IDLAQMPPTILLPHPGGTGAPTLERTSYLTGAQPPFPPRAFNPTSISPGHPVHLATSAER
EEREKEREHRERERDREIRERERTSEYMRGSGQEQPVRPGSRGYLHSPSPSLRTQDVVVQ
QRPSIFQGKSVITSLMAHPPPATSASQSSSRFSTAADALAALVDAAASAPQMDVSKVKES
RQEPDEEMATSVAGRRAPSRSEQQQEAERRSLHSPYSAMSLPGGKPHPAYPEGPGSGAKD
KVPQTKSRIEEELRTHGKTTITAASFIDVIITRQIASDKDSRERGSQSSDSSSSLSSIRY
DNSTGGAIEVISPPSSPVQSHQDKPEEGQQQAGVSMRPFEMSRYRPSGEPHQPAPSQADS
YSQVPKTHRVMTLADHISHIITQDFARNQDPPVSSSASATFQSSVPPVSSSGRVKGPSRY
SPENQVPASLHQRPSSRISPENPPDKPRVRPGKSPERGGRQMESYEPISPPQGYQAMDKL
EGGGPPSQRREADNSELRSDSRSPGSVSYLPSFFTKLENTSPMVKSKKQEIFRKLNTSGA
GDSDVGNTQPGTEIFNLPAVTSSSNINPRNPSFSDPASNLGLEDIIRKALMGNLEERQDE
HQGGGGPVAISNTSATDARQEASPSPSMGKQKQSKANSRKSKSPNLTQTYPGGERPSSVS
SVHSEGDYHRSTQQQWSWDDRPSSTGPMQFPCNPLTMRMLSNTPPTSMASPSIQSQQQQP
QAPPAGGQQRVWQSLLSEQYETLSDSDD
NT seq
6927 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagctcgggctacccccccacccaggggactttcagcagcgagcagagccga
tacccaccccactctgtccagtacacacttacgggctcacgccacacacaggagtttgcc
gtccaagactatcgtactcacatgcaggatccacaaggtcgaagaaggttgtctctactt
tctgaattccaccctgggattgaaaggcctccagagaggcgccatggttacgagccacag
tttcactccatcacagcccagcctgagcatgaagccttggaggctaaacgccctcgtatg
gagattgttgctgaaccccatatcacccgcaccccttccactgcgggtggccttgtactg
cccatgacacactctggacaggacagtttaagagccaccgtggaggtcaaaaaggagtct
cagtacattgtcaaagtggagtcaccatctgctggtggacctaccctacacatgggtgaa
gaacaggacacttctccttccaagctgtccaaggaggagttgatccagagtatggatcgt
gtggacagagagatcgctaaagtggagcagcagatttcaaagctgaagaagaagcagcaa
caacttgaggaggaagcagcaaagccggtggaaccggagaagcccgcgacccctcccccg
gtggagcacaagcaccgcagcattgtccagatcatctatgatgaaaacagaaaaaaagca
gaagaggcccataaagttttggtaaaccttggtcccaaagttgaactgccactgtataac
caaccatccgacacaaaagtgtatcatgacaacatcaagacaaaccaggtcatgagaaaa
aagctgattttattttttaagagaaggaatcatgcacgtaaacaaagggagcagaagatc
tgccagcgctatgaccagctgatggaagcatgggagaagaaggtggagcgcatggagaac
aatcccagacgcaaagccaaggagagcagaacgcgggaatattacgaaagacagttccca
gaaatccgcaagcagagggaacagcaggaacgcttccagcgagttggccaaagaggaaca
ggtctgtctgcaacaattgcaagaagcgagcatgaaatttctgaaatcatagatggtctc
tctgagcaagagaacaacgagaaacagatgagacagctgtcagtcattcctcctatgatg
tacgactcggagcagaggagggtgaagttcatcaacatgaacggcctgatggatgaccca
atgaaggtgtacaaagcccggcagttcatgaatgtttggacagagcatgaaaaggagatc
tttaaggagaagtttgtacagcacccgaaaaactttggcttgattgctacatatctggag
agaaaaagtgtggctgactgtgtcctgttttactacctgacaaaaaagaaccaaaactat
aagacactggtgagacggaactatggaagacggagaggaagaaatcagcaaataacacgt
ccctcacaggaagataagacagaggacaagaacgaagaggacaaatctgaaaaagtcgag
aaaaaagaggaggaggagaagaaggacgaggaagagaaagatgaaaaggaggattctagg
gacatcggcaaggacaaggacaaatgtgacggtggggaggacgaggacggaaaagagcaa
aacgcaccgcgtggcaggaagaccgccaatagccagggccgccgtaaaggaagaatcacc
acgcgctccatggccaatgaggctgcatcggtggcagctgaggaggctcctccccctgcc
cttgagcccgctgtggcagatcctgctcagctctccaagtctgacccagcacagaagggg
gccaaggaggcaaacaaacctgggactccagtagcttcagtggatactaaagctggtgcc
ggggaaacaggagaaacttctcgctggactgaggaggagatggaggttgccaaaaaaggg
ctggttgagcatggccgaaactggattgccatagccaaaatggtgggcacaaaaagtgag
gcacagtgcaaaaacttctatttcaattacaagcggcgtcacaacttggacaaccttctg
cagcagcataaacaggattctcggagggcacgttctgatagatctcaaagggaaggccaa
gccatggcatcacccgatgatgatgaggacaacgccgatgaaagtgaaggtggtgagaac
agctccgacacagagagtgccccctctccctcccaggctgactcctcaaaagttgctgac
tctaagcaagtggagagtaccacagcagacactctgagcacagacagtgacaaggatcta
accagcaatggaaaagctacagagcccccttatggggaacttcgtgtcaagcaagagaaa
agtccagagagggaaatgggatctcaggaagataagacgagagtggttgcttttcctggt
ccactacaccccaaaactgagcctcaagatgtagacatgaaagttggagaggttcaggtc
aagatggagcctgaagttaaggaaaaggttgaaaaaggagaccatggtgagaggcagagg
gacctccactctgataatgactcaagtgcaacctgcagtgcagatgaagaggtggaggcg
gagcctgatagacagagaatgtaccccatggaaaaaccgatgctgcgcagccctcctggc
tctgtgcttgtgccttcacccaagcaagcccacttcagcatgcagcagatgcagcaccgt
gcagccaacatccctcccatggtgcctggtccctatggccccggtggcgtttccatcact
ggttttgcgatgtttcaacaccagatcaaagcagtgcatgactccgcccaccaggaggag
aagcagaggcaggatctgggagacctggagcgcagacctcattacaacacgcgaagcccc
actgtgatggacagagatgttctccatccttctccaaatccgctggcccaaagtatgaac
gaaggtgttcgcgtgacgttccccaggcacaatcgacctccaaacattccctctcctcct
cccctcattccaaccacgaagcccacagataaaccctccttcatccaaggaggctccatc
tcccagggcactcctggaacatatctcccgtcccatgctgtctatggtcctgaggggacg
aagagctctgtaggctccatctctctgggtctgcctcgacagctggatccccacaagcct
ggaaatgcagtttcatctctgcaggacaacagaggcagctctgccaaagggagtgaaggc
ctcgctttcagaggatcaatcaccaaggggactccggcccttcctcagtccaatgtggct
gctgacctcctgaagggcacgatcacaaagctcactccagaggacctgagcagcccagac
aagactaaaggtcatgtcatctatgaaggcaagagtggtcacatcctctcctatgatgct
ataaagaatccgagggagaacacccgcagccccagaataggccacgagttaaaacgctcc
catgacatgatggagagttccatgggtcgaggacaccccggcagggagggggctccattt
gaagggctaattagcagagccttgcccagagaaggtctccatggcgactcaaaggaacga
ccactggcctctgggtccatcatgcatgggacaccaagaacagccactgactcatatgat
gatgccatgaagtatgggaagcagatgaggatggagagcccaccagtccgatcttttgaa
gggtctattggcaaaggcaagccctatgagggagtcaacaccatcaaagagatggggcgc
tccatccacgaaatccctcgacaggaccagtctgctcaggacatgtgcaagacccctgag
ctggtagacaggagggtgatggagggctccatacctcagattcactctctgggccagcct
gccatcaagcacaatgtcaagtcattaatcactagtccgaacaagatgccccacaccatg
ccccagctcgaggcaatagaccgagccaaatatgaggagagtaaggcggtgcggcacacc
tctgtggttaactccaccacgtctgtcctgcgctctactcaccaggaggctggcaaagct
cagcacagtccgagcatgtacgaggactccagtgctcgcaggacccctgtgaactacagc
accaatcctgtttccagaggatcacccatgctgcgatgtccagatggtgtcatgagctct
gccaagtctgctgctcatgacagaaagagtgccatgaccccgacacaaagggacagtgtc
ccggccaagtccccggtgtcaggtggcgatcccgtagcctctcatagccccttcgacccc
caccaccggcctgttgttccaggagaagtgtacagggctcacatgcttccacacctggac
cccagcctggccttccacagggggctggatcctgcattcatgttccccaggcagccgtcc
ccaacaggataccataacacctatcagttgtacgccatggaaaacacgcgtcagaccatc
ctcagtgattatatcacatcccagcagatgcaagtcatccctcggccagatatggcaaga
ggactgtctccaagggagcaggctgttgcagtcccttacccagccaacgctcgagggaat
attgatctagcccagatgcctccaactatcctgttgcctcatcctgggggaacaggtgct
cccactttggaacgcacctcctacctcactggagctcagccccctttccctcctagggct
ttcaacccaacttccatttcaccaggtcatccagtccatctggccaccagtgctgagagg
gaggagcgggagaaggagcgggagcaccgcgagagggagcgagaccgggaaataagagag
agggagcgaaccagtgaatacatgcgtggaagtgggcaggagcagccagttcgaccagga
agtcgaggttacctgcactccccatctccctcgctcaggacacaggatgtggtggtgcag
cagagaccaagtatcttccagggaaagagtgtcatcacctctttaatggctcatccacct
ccagcaacatcagcatcccagagtagctcccgcttcagcacagcagcagacgctctggct
gccttggtggacgcagccgcctctgctcctcagatggacgtctccaaggtgaaggagagc
aggcaagaaccggacgaggaaatggccacatcggttgcgggcaggcgggcacccagccgc
tcagaacagcagcaggaggcagaaaggcgatctctgcactcgccgtatagtgccatgtct
ttgccaggtggcaagccccatccagcttaccccgagggcccgggtagcggggcaaaggat
aaggttcctcaaaccaagtcccgcatcgaagaggagcttcggactcacggaaagacaact
attacagctgctagcttcatcgatgtcatcatcactcgccagatagcttcagacaaggac
tcccgtgaacgaggctcgcagagctcggactcctccagcagtttatcgtctattcgatat
gacaactccactggaggagccattgaggtgataagccctcccagttccccagtccaatcc
catcaggacaaaccagaagaggggcaacaacaagcaggagtcagcatgcggcctttcgag
atgagccgatatcgaccttcaggggagccccaccagcctgccccctcccaagcagatagc
tactctcaggtccctaaaactcacagggtcatgaccttggctgaccatatttcacacatt
atcacacaggactttgccagaaaccaggaccctccggtctcttcttcagcttctgccaca
ttccagagctcagttccacctgtgtcatcgtcgggtcgggtcaagggtcctagtcggtac
agtcctgagaaccaggtccctgcttcactccaccaaaggccatctagcaggatttctcca
gagaatccccccgacaagcccagagtgaggcctggtaaatctccagaaagaggaggcaga
cagatggagagctatgaaccaatttctcccccgcagggatatcaagccatggacaaactg
gagggaggcgggcctccatcccaaagacgagaggctgacaactctgagctcaggagtgac
tcacggtctccaggaagtgtcagctacctgccttccttcttcaccaagctagagaatacg
tcgccaatggttaaatccaagaagcaggaaatctttcgtaagttgaacacctctggtgct
ggtgattctgatgtgggaaatacacaaccaggcacagaaattttcaacttgcctgctgtt
accagctccagtaacattaacccaagaaatccgtccttcagtgacccggccagtaacctg
ggtctggaggacatcatccgcaaggctttaatgggcaacttggaggaaaggcaggatgaa
caccagggaggagggggccctgtggccatcagcaacacgtctgccactgatgcccgccag
gaggccagtccatcccccagtatggggaagcagaagcagagcaaagcaaacagccgaaaa
tccaagtcgcctaacctgactcagacgtatcctggaggggagcgtccctcctcagtgtcg
tctgtccactctgaaggtgattatcacagatcaacccagcaacagtggagctgggatgac
cgaccttcatccacaggtcccatgcagtttccatgcaatccactgaccatgcgcatgctg
agcaacacgccacccacctccatggcctctccctcaatccagagccagcagcagcagccg
caggcaccccctgctggaggccagcagcgagtgtggcagtctctgctgtcagagcaatac
gagaccctgtctgacagcgacgattga
DBGET
integrated database retrieval system
