Oryzias melastigma (Indian medaka): 112141799
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Entry
112141799 CDS
T07439
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03082
ATP-dependent chromatin remodeling
oml03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112141799
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112141799
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112141799
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112141799
03036 Chromosome and associated proteins [BR:
oml03036
]
112141799
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112141799
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112141799
SWI/SNF complex
112141799
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112141799
PBAF complex
112141799
SWI/SNF complex
112141799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
112141799
NCBI-ProteinID:
XP_024120729
Ensembl:
ENSOMEG00000016777
LinkDB
All DBs
Position
Unknown
AA seq
373 aa
AA seq
DB search
MALSKTFGQKPVKFQLEEDGEYYMIGSEVGNYLRMFRGSLYKRYPSLWRKLATVDERKKI
VESSHDHDYTQLATSVTLLKASEVEEILEGNDEKYKAVSISTEPPAYLREQKAKRNSQWV
PTLPNSSHHLDAVPCSTTINRSRLGRDKKRTFPLCFDDHDPAVIHENAIQTEVLVPIRLD
MEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLTFVPAIASAIRQQIESYPTDS
LLEEQTDQRVIIKLNIHVGNISLVDQFEWDMSERENSPEKFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNT
RRMRRLANTAPAW
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgagtaagacgtttggacaaaaaccggtcaaatttcagctcgaggaagatggg
gagtattatatgattggatcggaggtgggaaattacctacgaatgtttagaggttcactg
tacaaaagatacccgtcattatggagaaaactggcaacggtagatgaacgcaagaaaata
gtggaatcgtcacacgaccacgattacactcaactggccaccagtgtgacgctgctgaag
gcctccgaggttgaagagatcttggaaggaaacgatgagaagtacaaagctgtctccatc
agcacagagccccccgcctacctcagggagcagaaagcaaagaggaacagtcagtgggtt
cccacgctgcccaacagctctcatcatctagacgcagttccttgctccaccaccatcaac
cgcagtcgactaggtcgcgataagaagaggactttccccttgtgctttgatgaccacgat
ccagcagttatccatgaaaacgccattcagactgaagttctggttccaatccggctagac
atggaaatcgagggacagaagcttagggatgcttttacctggaatatgaatgaaaagctc
atgacccctgagatgtttgctgaaatcctttgtgatgacctggacctcaatcctctgacc
ttcgtccctgccattgcctctgccattcggcagcagattgagtcgtacccgacagacagt
ctcctagaagagcagacagaccagagggtgatcatcaagctcaatatccacgttggtaac
atttccttggtggaccagtttgagtgggacatgtctgagagggagaactctccagagaag
tttgccctgaagctttgctctgaactgggtctgggaggagaatttgtcaccaccattgcc
tatagcatccgaggtcagctgagctggcaccagaggacgtatgctttcagtgagaatcct
ctgccaacagtggagatcgccatcagaaacacaggggatgctgaccagtggtgccccctg
ctggagaccctgacagatgcagaaatggagaagaagatcagagaccaggacagaaacaca
aggcgaatgagacgattggctaacacagcaccagcatggtag
DBGET
integrated database retrieval system
