Oryzias melastigma (Indian medaka): 112141831
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Entry
112141831 CDS
T07439
Name
(RefSeq) transcription factor COE3 isoform X1
KO
K09103
early B-cell factor
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112141831
Transcription factors [BR:
oml03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112141831
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Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
112141831
NCBI-ProteinID:
XP_024120767
Ensembl:
ENSOMEG00000000381
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All DBs
Position
LG19:4559898..4603565
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AA seq
594 aa
AA seq
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MFGIQDNLPRGATANMKEEPLAVRSWMHAAGVVDANTAAQSGVGLARAHFEKQPPSNLRK
SNFFHFVLALYDRQGQPVEIERTAYVDFVEKEKEPSGEKTNNGIHYKLQLLYSNGVRTEQ
DLYVRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIID
RFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRA
RRLDPSEATPCIKAISPSEGWTTGGATVILIGDNFFDGLQVVFGTMLVWSELITPHAIRV
QTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPER
LPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPSLGNTTSHGM
MGVNSFSGQLAVNVSETTQGVALSESAKDTTSTSADRRFLSLSVGYSRNTSSVSPRGYAP
SSTPQQSNYGNTVSNSMNGYGNTGMPNLGVATSPGFLNGSSANSPYGIVPSSPTMAVSNC
NSSHGVFSFSTAVKQKSAFAPVVRPPTSPPPPPNCSANGANGLQAMSGLVVPQM
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcatccaggacaacctgccccgcggggccacggccaacatgaaggaggagccg
ctggcggtgcgctcctggatgcacgccgccggcgtggtggacgccaacacggccgctcag
agcggggtggggttagcccgggctcacttcgagaagcagcccccgtccaacctgaggaag
tccaacttcttccacttcgtgctggcgctgtacgaccggcagggccaaccggtggagatc
gagcgcaccgcctacgtggactttgtggagaaggagaaggagccgagcggagagaaaacc
aacaacgggatccactataagctgcagctgctctacagtaacggagtgagaacggagcag
gacctgtacgtccgcctcatcgactccatgaccaaacaggccatcatctacgagggtcaa
gacaagaaccccgagatgtgccgggttctgctgacacacgagatcatgtgcagccgctgc
tgtgataagaagagctgtggaaacaggaacgagacgccgtcggaccccgtcatcatcgac
aggttcttcctcaagttcttcctgaagtgtaaccagaactgtctgaagaacgccgggaac
ccccgagacatgaggaggtttcaggtggtggtttcgacgaccgtgaacgtggacggtcac
gtgctcgctgtttctgacaacatgtttgtgcacaacaactccaaacacggacggcgggcg
cggcggctggatccgtctgaggccactccctgcataaaagccatcagtcccagtgagggc
tggacgacgggcggagccaccgtcatcctcatcggggacaacttcttcgatggtcttcag
gtggtcttcggcaccatgctggtgtggagtgagctgatcaccccccacgccatccgggtc
cagactccgccccgccacatccccggggtcgtcgaggtcacgctgtcctacaagtccaaa
cagttctgtaagggggcgccgggacgcttcgtctacacagcgctgaacgaacccaccatc
gattacggcttccagaggttacagaaggtcatcccccgtcaccccggagaccccgagaga
ctgcccaaggaggtcctgttgaagagagcggctgacctggtggaggcgctctacggcatg
ccgcacaacaaccaggaaatcatcctaaagcgagcagcagacatcgctgaagccctctac
agcgttccccgaaaccacaaccagatcccttcgctcggcaacaccacctcgcacggcatg
atgggagtgaattccttcagcggacagctggccgtcaatgtttctgagaccacgcaaggt
gtggctctgagcgagagcgccaaagacacgacctccacgtcagctgacagacgcttcctg
tctctttcagttggttacagcagaaacaccagcagcgtgtcgccacgaggatacgcccca
agctccacccctcaacagagtaactatggtaacaccgtcagtaacagcatgaacggctac
ggcaacactggcatgccaaacctcggagtggcgacgtctcctggtttccttaacggctct
tctgccaactccccctacggcatcgtcccgtccagtcccaccatggccgtgtccaactgt
aactcctcccacggagtcttctccttctccaccgctgtcaaacagaagagcgccttcgct
cccgtcgtccggcctccaacgtcccctccccctccccccaactgttcagccaacggcgcc
aacggacttcaagccatgtccggactcgtcgtcccgcagatgtag
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