Oryzias melastigma (Indian medaka): 112141842
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Entry
112141842 CDS
T07439
Name
(RefSeq) protein Tob1
KO
K14443
protein Tob/BTG
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112141842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112141842
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112141842
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112141842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
SinI
T2SSM
Motif
Other DBs
NCBI-GeneID:
112141842
NCBI-ProteinID:
XP_024120776
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All DBs
Position
LG19:complement(5089897..5092440)
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AA seq
323 aa
AA seq
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MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKRKYDGHWYPEKPYKGSGFRCIHV
GEKVDPVVEQAAKESGLDIEDVRNNLPQDLSVWIDPFEVSYQIGEKGAVKVLYVDDNGEN
GSELDREIKNSFNPEAQVFMPISDPAGASPESSSPSPPFGQSAAVSPSFMPRSAQPLTFT
TATFAATKFGSTKMKSSSRSGAGGGGASSKAARASPTSNLGLNLLKQKAMSSSMHSLYGP
GQPKSSALSPNAKEFVFSSLQGQASPGAVFPGEGSLGLGALQYNNAFDVLAAYGGLSEKS
LMDGLGLGGVAYSNQQFQPVMAN
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcagctggaaatccaagtcgccctgaacttcatcatctcctatttgtacaacaagctt
cccagacggcgcgtgaacatcttcggggaggagctggagcggcagctgaagcggaagtac
gacggccactggtaccccgagaagccctacaaggggtccgggttccggtgcatccacgtg
ggcgagaaggtggacccggtggtggagcaggcggccaaggagagcgggctggacatcgag
gacgtccggaacaacctcccccaggacctgagcgtgtggatcgacccgttcgaggtgtcc
taccagatcggggagaagggggcggtgaaggtgctgtacgtggacgacaatggcgagaac
ggctccgagctggacagggagatcaagaacagcttcaacccggaggcccaggtctttatg
cccatcagtgacccggcgggggcgtcgcccgagtccagctcgccttccccgcccttcgga
cagtcggcggcggtgagcccgtccttcatgccgcgctccgcccagcccctcaccttcacc
accgccaccttcgccgccaccaagttcggctccacgaagatgaagagcagcagccgcagc
ggcgccggcggcgggggggccagcagcaaggcggcccgtgcctcccccaccagcaacctg
gggctgaacctcctgaagcagaaagccatgtcctcctccatgcactctctgtacgggccg
ggccagcccaagagctccgccctctcccccaacgccaaggagttcgtcttctccagcctg
cagggtcaggccagccccggcgctgtcttcccgggggaggggtctctgggcctgggggcg
ctgcagtacaacaatgccttcgacgtgttggcggcctacggcggcctgagcgagaagtcc
ttgatggacgggctgggcctggggggtgtggcctattccaaccagcagttccagcccgtc
atggccaactga
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