KEGG   Oryzias melastigma (Indian medaka): 112141842
Entry
112141842         CDS       T07439                                 
Name
(RefSeq) protein Tob1
  KO
K14443  protein Tob/BTG
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112141842
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oml03019]
    112141842
Messenger RNA biogenesis [BR:oml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112141842
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     112141842
SSDB
Motif
Pfam: BTG PAM2 SinI T2SSM
Other DBs
NCBI-GeneID: 112141842
NCBI-ProteinID: XP_024120776
LinkDB
Position
LG19:complement(5089897..5092440)
AA seq 323 aa
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKRKYDGHWYPEKPYKGSGFRCIHV
GEKVDPVVEQAAKESGLDIEDVRNNLPQDLSVWIDPFEVSYQIGEKGAVKVLYVDDNGEN
GSELDREIKNSFNPEAQVFMPISDPAGASPESSSPSPPFGQSAAVSPSFMPRSAQPLTFT
TATFAATKFGSTKMKSSSRSGAGGGGASSKAARASPTSNLGLNLLKQKAMSSSMHSLYGP
GQPKSSALSPNAKEFVFSSLQGQASPGAVFPGEGSLGLGALQYNNAFDVLAAYGGLSEKS
LMDGLGLGGVAYSNQQFQPVMAN
NT seq 972 nt   +upstreamnt  +downstreamnt
atgcagctggaaatccaagtcgccctgaacttcatcatctcctatttgtacaacaagctt
cccagacggcgcgtgaacatcttcggggaggagctggagcggcagctgaagcggaagtac
gacggccactggtaccccgagaagccctacaaggggtccgggttccggtgcatccacgtg
ggcgagaaggtggacccggtggtggagcaggcggccaaggagagcgggctggacatcgag
gacgtccggaacaacctcccccaggacctgagcgtgtggatcgacccgttcgaggtgtcc
taccagatcggggagaagggggcggtgaaggtgctgtacgtggacgacaatggcgagaac
ggctccgagctggacagggagatcaagaacagcttcaacccggaggcccaggtctttatg
cccatcagtgacccggcgggggcgtcgcccgagtccagctcgccttccccgcccttcgga
cagtcggcggcggtgagcccgtccttcatgccgcgctccgcccagcccctcaccttcacc
accgccaccttcgccgccaccaagttcggctccacgaagatgaagagcagcagccgcagc
ggcgccggcggcgggggggccagcagcaaggcggcccgtgcctcccccaccagcaacctg
gggctgaacctcctgaagcagaaagccatgtcctcctccatgcactctctgtacgggccg
ggccagcccaagagctccgccctctcccccaacgccaaggagttcgtcttctccagcctg
cagggtcaggccagccccggcgctgtcttcccgggggaggggtctctgggcctgggggcg
ctgcagtacaacaatgccttcgacgtgttggcggcctacggcggcctgagcgagaagtcc
ttgatggacgggctgggcctggggggtgtggcctattccaaccagcagttccagcccgtc
atggccaactga

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