Oryzias melastigma (Indian medaka): 112141995
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Entry
112141995 CDS
T07439
Symbol
adarb1a
Name
(RefSeq) double-stranded RNA-specific editase 1 isoform X3
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112141995 (adarb1a)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112141995 (adarb1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
112141995
NCBI-ProteinID:
XP_024120986
Ensembl:
ENSOMEG00000010969
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All DBs
Position
LG2:19782489..19798834
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AA seq
678 aa
AA seq
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MSSCITDVKENCSLKNLLSQQEVAAPAPQLSKGRCGRKRPLEEGNRGHAHHYKPRKKLRR
PAPPKNALTQLNEVQPGLQYTLLSQTGPVHAPLFVMKVEVNGRFYQGAGPTKKKAKLSAA
EKALQSLLQVRGTAQAPRNLSVHTDFTSDVAVFPSILFKAFETPGPSLPTPSDSPSSFSP
KGAKNPVMMLNEMRPGLRYDLVSESGESHAKNFVVSLTVDDQTFQGSGRNKRLAKARAAL
AALQVLFNLQPERGLSRQPIPQDGPQLHLPQVLADAVSRLVLQKFSQLLDNFTSPLAQRK
ALAGVVMTTGDDVEQAEVICVSTGTKCISGEHLSEHGLALNDCHAEVVARRCLVRFLYSQ
LELFLSEDEDDHQKSIFRRCERGRGFRLKDKVQFHLYISASPCGDARIFSPHEAGVEGEH
TGVQTPVPCDVCRFISSPPVPSDLGDGPASRRTRGGLRTKIQTGEGTVPVPCGDPRQTWD
ALRRGEKLLTMSCSDKMARWNVLGFQGSLMSHFTEPLYFSSIIVGSLYHAAHLSRAMYQR
IGQLEALPPAFCLNRPLLSGISNTEARQPGRAPNFSVNWTVGDRGLEVIDSTTGKDDLGR
PSRLCKRAFYHGWTLLHSRLSSSLRLHAVRSSSYHEAKRAAVDHHSAKQTLCRALAEAGL
GSWVKKPAEQDRFSLSSC
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctgcatcaccgacgtcaaagaaaactgtagcctgaaaaacctcctttcacag
caggaagtcgcagctcctgctcctcagctctcaaaggggaggtgtgggagaaaacgacct
ctggaggagggcaacagaggccacgcccaccattacaaacctaggaagaagctgcgacgg
ccggccccgcccaagaacgccctgacgcagctgaacgaggtccagccggggctccagtac
acgctgctgtcccaaaccgggccggtccacgcgcccctcttcgtcatgaaggtggaggtc
aacgggcggttctaccagggggcggggccaaccaagaagaaggccaagctgagcgcggcg
gagaaggctctacagtcgctgctgcaggtccgcggcaccgctcaagctccccggaatttg
tccgtccacacagacttcacctctgatgtggcagtttttcccagcatcctctttaaggcc
tttgagacccccggcccatccttgccgacaccttcagattctcccagctccttctccccg
aaaggtgccaagaacccggtcatgatgctcaatgagatgcgtcccggcctccggtacgac
ctggtctctgagagtggggagagccatgccaagaacttcgtggtgtcattgacggtcgac
gaccagacgtttcagggctccggaaggaacaagcgactggccaaagcccgggcggcgctg
gccgctctgcaggtgctcttcaacctgcagcccgagcggggactgtccagacagcccata
ccccaggatgggccgcagctccacctgccacaggtcctggcggacgccgtctctcgtctg
gtcctccaaaagttcagccaactgttggacaacttcacgtctccgctcgctcagcggaaa
gctctggcgggagttgtcatgacaacaggtgatgacgtggagcaggcggaggtcatctgc
gtatcaacaggaaccaagtgcatcagtggagaacacctgagcgagcacggtttggccctc
aacgactgccacgccgaggtggtcgcccgccgctgcctcgtccgctttctgtactcccag
ctggagcttttcctcagtgaggatgaagacgaccaccagaagtccatcttcagaagatgt
gagcgtgggcggggcttcaggttgaaggacaaagttcagttccacctctacatcagcgcc
tccccctgtggggacgcccgcatcttctccccccacgaggcgggggtggagggtgagcac
acgggggtccaaactccagtgccatgtgacgtctgccgcttcatctcctctccgcccgtc
ccttcagatctgggcgacggacctgcgagcagaaggacccgcggaggtctgcgcactaag
atccagaccggggaagggaccgtcccggttccctgcggggacccccgccagacctgggac
gcgcttcgacggggggagaagctgctcaccatgtcctgcagtgacaagatggccaggtgg
aacgtgttgggcttccagggctctctgatgagccacttcaccgagccgctgtacttctcc
agcatcatcgtgggcagcctgtaccacgccgctcacctgtccagggccatgtaccagagg
atcggccagctggaggctctgccgcctgctttctgcctcaaccggccgctgctcagcgga
ataagtaacaccgaggcccggcagcctggaagggctccaaacttcagtgtgaactggacc
gtaggagaccggggtttggaggtgatcgactccaccacggggaaagatgacctgggtcga
ccctccagactctgcaaacgagccttctaccacggctggacgctgctgcacagcaggctg
tcctcctccctgcggctccacgccgtgcgctccagcagctaccacgaggctaagcgtgcc
gccgtggaccaccactccgccaagcagacgctctgcagagctttagctgaagctggactg
ggctcctgggtcaagaagccagcagaacaggaccgcttcagcctgagcagctgctga
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