Oryzias melastigma (Indian medaka): 112142015
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Entry
112142015 CDS
T07439
Symbol
atg3
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG3
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04136
Autophagy - other
oml04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112142015 (atg3)
04136 Autophagy - other
112142015 (atg3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112142015 (atg3)
04121 Ubiquitin system [BR:
oml04121
]
112142015 (atg3)
03029 Mitochondrial biogenesis [BR:
oml03029
]
112142015 (atg3)
Membrane trafficking [BR:
oml04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
112142015 (atg3)
Ubiquitin system [BR:
oml04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
112142015 (atg3)
Mitochondrial biogenesis [BR:
oml03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112142015 (atg3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Med13_N
Motif
Other DBs
NCBI-GeneID:
112142015
NCBI-ProteinID:
XP_024121019
Ensembl:
ENSOMEG00000010344
LinkDB
All DBs
Position
LG2:complement(20143871..20153829)
Genome browser
AA seq
314 aa
AA seq
DB search
MQNVINTVKGTALGVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWASGEE
AKVKPFLPPDKQFLLTRNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNSGLLGVT
DAVQEISLDNNKDKNMNATSTPCCDDDDEDDEGEAADMEEYEESGLLETDEATLDTRRVV
ESKAKADPGSEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEDRQPLTVEQMYEDISQDH
VKKTVTIENHPHLPPPAMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQAV
IPTIEYDYTRHFTM
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgtgatcaacacggtgaagggcaccgcgctcggcgtggccgagttcctcacg
ccggtgctgaaggaatcgaagttcaaagagacgggggtgatcactccagaggagtttgta
gcagcaggagatcacctggttcaccactgtcccacctggaaatgggccagcggggaggaa
gcgaaggtgaagccattcctgccgccggacaaacagttcctgttgactcgcaatgtcccc
tgctacaagcgctgtaaacagatggagtactctgacgagctggaggccatcatagaggag
gacgacggcgacggcggatgggtggacacttaccataactcaggtctgttaggagtcact
gacgctgttcaggagatttctttggacaacaataaggacaagaacatgaacgccacatcc
acgccgtgctgcgacgacgatgacgaggacgacgagggcgaggcggcagacatggaagag
tacgaggagagcggcctgctggagacggacgaggccaccctggacactcgcagagtcgtg
gagagtaaagcgaaagcagatcctgggagcgaggacgccatcctccagaccagaacctac
gacctgtacatcacctacgacaaatactaccagacgcctcgactctggctgttcggatac
gacgaggacaggcagccgctcacggtggagcagatgtacgaggacatcagccaggaccac
gtgaagaagaccgtcaccatcgagaaccacccgcacctccccccacctgccatgtgctcc
gtgcatccatgcagacacgcagaggtgatgaagaagatcatcgagactgtggccgaagga
ggcggagagctgggagtccacatgtacctgctgatcttcctgaagttcgtgcaggccgtc
attcctacgatagagtacgactacaccagacacttcaccatgtag
DBGET
integrated database retrieval system
