Oryzias melastigma (Indian medaka): 112142074 Help Entry 112142074         CDS       T07439                                  Symbol tnc Name (RefSeq) tenascin isoform X1   KO K06252   tenascin Organism oml  Oryzias melastigma (Indian medaka) Pathway oml04510   Focal adhesion oml04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:oml00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     112142074 (tnc)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     112142074 (tnc)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oml00536]     112142074 (tnc) Glycosaminoglycan binding proteins [BR:oml00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    112142074 (tnc) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 EGF_TEN Fibrinogen_C EGF_Teneurin EGF_2 EGF_Tenascin Ig_DSCAM-DSCAML_C Pur_ac_phosph_N Fn3_Dep-1_2nd EGF REJ hEGF NDNF_C Motif Other DBs NCBI-GeneID:  112142074 NCBI-ProteinID:  XP_024121092 Ensembl:  ENSOMEG00000009149 UniProt:  A0A3B3BRS4 LinkDB All DBs Position LG13:32605845..32663970 Genome browser AA seq 1509 aa AA seqDB search MEMRGFLLRCFTAALLSQISTCGLIKKVIRHQREALMPKNTQENLTLPHPDQPVVFNHVY NINVPSAPLCSVDLDSPGGSSPKTAGMEVQNSDQMEHTLDGDNQIVFTHRISIPKQACGC NNQLPDMKEILSRLEMLESELSSLREQCSSGAGCCGAQVTAGELSTKPYCNGRGNWSTDS CSCTCEPGWKGPNCTEPECPNDCQDQGRCVDGQCECFEGFTGDDCSIEMCLMDCGDYGHC VEGSCLCEEGFIGEDCSQTNCLHNCLGRGRCVEDECICDHPWTGFDCSELICPNDCYDRG QCINGTCYCEEGYTGEDCGQLTCPANCNDRGTCVDGQCVCQTGYSGEDCSKLTCPKNCHE RGHCFNGKCICDPGFEGGDCSILSCPDNCSNNGQCINGECICDIGYQGEDCSELSCPNNC QERGRCINGECICEKGYAGEDCSTKTCPRDCMGRGDCVDGKCVCLVGFTGKDCSELTCPN NCQDQGQCVNGQCVCQQGFTGEDCSEKTCPSNCLDRGYCVDGSCVCYEGFTGPDCSVLTC PGDCQNQGSCDNGVCVCHEGFIGEDCSDVSPPKDLTVVEVTPETVDLSWENDMHVTEYLI TYIPTAPGGLELDMRVAGDQKEATIRELEPGVEYLISVYAVLSNKRSVPVSARVATHLPE PEGLKFKSVRETSVEVQWDPLDIPFDGWNLIFRNTKEEDGEILNSLGRPETVFEQSGLGP GQEYEVKLEVVKNSKRGPPASKSVVTMIDAPRHMDVRDVTDNTALVTWFHPVADVDGISI SYGPSSDPANRRAVELPPTDTQFHLGGLTADTQYDVSLKAKKGDQTSSPAHSSFLTDLDP PRNLKTVELTDESITLEWENSRAQVDNYRIKYGPLSGGEHRELLFPPGFKHSTQAKISGL RPGTEYGMGVTAVRAERESLPTTTNAVTALDAPKDLTVAQVTETSMMLLWKRPLAKLDSY RLVYVSAEGHQMEEALPASSESHTLKGLIPGMLYTVSISAERGHRTSAPATASAPTELGP PKAIRFSEVTDTSATVHWMTPGAPVDSYLVAYVPAHGGNGRTLTVDGSESHTVLPNLTPG VTYEVTIVAVKSERESKPGSESVTTALDKPRGLTAVNITDSEALLLWQPAIATVDGYVIS YSADSGAPVMMRVSGNVVEFEMSSLTPATHYTVKVYAVRDLAKSAATTTEFTTDVDAPQD LTASNIQTESALLTWKPPRANISAYILSFEAVDGAVREVVLSPAAVSYNMVQLSASTEYS VRLQAQAGPKKSGVVTTVLTTTGVLYRHPRDCSQALLNGDATSGLHTVYVGGDEKQPLQV YCDMSTDGGGWIVFLRRKSGKVEFFRNWKNYTGGFGDMNDEFWLGLSNLHKITAGGQYEL RVDLKDKGETAYAQYEKFSVSEPRSRYKVHVGGYSGTAGDSMTYHHGRPFSTYDHDNDIA VTNCALSYKGAFWYKNCHRVNLMGRYGDNNHSKGVNWFHWKGHEHSIEFAEMKIRPSNFR NLEGRRKRS NT seq 4530 nt NT seq  +upstreamnt  +downstreamnt atggagatgagaggattcctcttgcgctgctttactgcagccttactaagtcaaatatct acttgtggcttgatcaagaaggtgattcgccaccaaagggaggccctaatgcccaagaac acccaggaaaatctcacgcttccccatcctgaccagccagtagtgttcaaccatgtctac aacatcaatgtcccatctgctccactctgctccgtggacctggactcgcctggaggatcc agtccgaagactgctggcatggaggtgcagaacagtgatcaaatggagcacacgctggat ggcgacaaccagattgtcttcacccaccgcatcagcatccccaaacaagcttgtggctgc aacaaccagctaccagacatgaaggagatcctgagccggctagaaatgttggagtccgag ctgtccagcctgagggagcagtgcagcagcggagcgggctgctgtggagctcaagttaca gcaggtgagctgtctacaaagccatactgtaacgggcgtggaaattggagcacggatagc tgcagctgcacctgtgaacctggatggaagggccccaactgcacagagccagagtgcccc aacgactgccaggatcagggtcgctgtgtcgatggccagtgtgagtgcttcgagggtttc accggtgacgactgcagcatcgagatgtgcctgatggactgtggtgactatggccactgc gtggaggggtcctgtctttgcgaggagggcttcattggtgaagactgctcccagactaac tgcctccacaactgccttggccgtgggcgctgcgtggaggacgaatgcatctgtgaccat ccgtggacaggattcgattgctctgagctcatctgtcccaacgactgctatgaccgaggg caatgcatcaatgggacttgctactgtgaagagggctacactggagaggactgcggacag ctcacctgtcctgctaactgcaacgatcgtggtacctgtgtggatggccaatgtgtttgt cagacgggctacagcggggaggactgctcaaagctcacctgccctaagaactgccacgag agaggccactgcttcaatggaaaatgtatctgtgatcctgggtttgaggggggggactgc tccatcctctcctgtcctgacaattgcagcaacaatggccagtgtattaatggggaatgc atatgtgacattggataccagggtgaagactgcagcgagctgtcctgccccaacaactgc caagaaagaggacggtgcatcaacggggagtgcatatgtgaaaaaggctacgcaggggag gactgcagcaccaagacctgtcccagagactgcatgggcaggggagactgtgtggatggg aagtgtgtgtgtcttgtgggcttcacaggcaaagactgcagtgagctcacctgtcccaac aactgccaggaccaaggtcagtgtgtaaatggacagtgtgtttgccagcagggtttcact ggtgaggactgcagtgagaagacgtgccccagcaactgtctggacagaggctactgcgtc gatggcagctgtgtctgctacgagggcttcaccgggccggactgttctgtgctgacctgc ccaggagactgccagaaccaggggagctgtgacaatggagtttgtgtttgtcatgagggc ttcattggagaggactgttccgatgtctctccacccaaggacttgacagtggtggaggtc actccagaaacagttgatctctcctgggagaacgatatgcatgttacagagtacctcatc acctatatacccacggctcctggaggtcttgagctggacatgcgggtggctggggaccag aaggaggccactattcgggagttggagcctggtgtggagtacctgatcagtgtctatgct gtactcagcaacaagaggagtgtccctgtcagtgctagggtggctacacatcttcctgag cctgagggtctgaagttcaagtcagtgagggaaacatctgtggaggtgcagtgggaccct ctggatattccttttgatggctggaatctcatcttcaggaatacaaaagaagaggatggt gagattctgaactctcttggtcgcccggagaccgtctttgagcagtccggcctgggtcca ggacaggaatacgaggtcaaactagaggtggtgaagaacagcaagcgtggacctccagcc tccaaaagcgttgtcacaatgattgatgccccccgccacatggatgtccgtgatgtgacc gacaacactgcgttggtcacctggttccaccctgtggcagacgtggacgggatcagcatt tcctatgggccgagctcggatcctgccaatcgcagggctgtagagctcccccccactgac actcagttccatctcgggggcctcactgctgacacccaatatgatgtgtccctgaaagca aagaaaggtgatcagaccagcagccccgcccacagttccttcctcacagacctggacccc cccaggaacttgaagacagtggagctgaccgatgagagcatcactctagagtgggaaaac agccgagctcaggtggacaactatcgcatcaagtacggacctctgtccggaggcgagcac agagaactgctcttccctcccggattcaaacactccacccaggccaaaatctctggcctg agaccgggaacagagtatgggatgggcgtgacagcagtgagagcagagcgggagagttta cccacaaccaccaacgcagtgacagctctggatgctccaaaagacctgactgtggcccag gtgaccgagacctccatgatgctgctgtggaagcgtcctctggccaaactggactcctac aggctggtctacgtgtcagcagagggtcaccagatggaggaagcgctgccggccagctct gaatctcacaccttgaaggggttgatccccggcatgttgtacaccgtcagcatcagcgca gagaggggccacagaaccagcgcacctgctactgcctcagcacccacagaactgggccca cctaaagccatccgcttctctgaagtgactgacacatcggccacggttcactggatgact ccgggggctccggtggacagctatttggtggcctatgtccctgcccatggaggaaatggc aggactctgacagtggacggctccgagtctcacacagtgctgcccaacctaactccaggg gtcacttatgaggtcacaattgttgctgtcaagagtgaaagagagagcaaacctggatct gaaagcgtcaccacagctctggataagcctcgcgggctgactgcagtcaacatcactgac tctgaggctttgctgctctggcaaccagccatcgctaccgtggatggttacgtcatttcc tacagtgcagactctggggctcctgtaatgatgcgtgtatctgggaacgtggtggagttt gaaatgagctcgctgacaccagcgactcactacactgtgaaggtgtacgccgtgagggat ttagccaagagtgctgctacaacaacagagttcacaacagatgtagatgcgccccaggac ctgactgccagtaacatccagacagaaagtgctttgcttacctggaaacctcctcgagcc aacatcagtgcctacatcctcagctttgaggctgtggacggagctgtgcgggaggtggtc ctcagccccgctgcggtgtcctacaacatggtccaactcagcgcctccacggaatactct gtcaggttgcaggcccaagctggtcccaagaagagcggtgtcgtcaccactgtcctcacc accactggggtactgtacagacacccccgagactgttcacaggctctgctgaacggagac gccacatccggcctgcacaccgtctacgtgggcggagatgagaagcagccgctgcaggtc tactgtgacatgagcacagatggaggcggctggatcgttttcctgcggcggaaaagtgga aaagttgaatttttccgcaactggaagaactacacaggtggctttggagacatgaacgac gaattctggctcggtctgtccaacctccacaagatcaccgctggggggcagtacgagctg cgagttgaccttaaagataaaggagagacagcatacgctcagtatgaaaaattctctgtg tctgaaccgcgaagccgatacaaagtgcatgtgggaggatacagtgggacagcaggggac tctatgacttaccatcacggccgaccgttctccacctacgaccatgacaacgacatcgct gtcaccaactgtgctctgtcctacaagggagccttctggtacaagaactgtcaccgagtc aacctgatgggccgatatggagataacaaccacagcaagggagtgaactggttccactgg aaaggccatgagcactccattgagtttgcagagatgaagatcagaccgtcaaacttcaga aacctggaaggaagaagaaagagatcataa

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