Oryzias melastigma (Indian medaka): 112142127
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Entry
112142127 CDS
T07439
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112142127
04121 Ubiquitin system [BR:
oml04121
]
112142127
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112142127
Membrane trafficking [BR:
oml04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112142127
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112142127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
HypA
Zn_ribbon_6
C1_2
DZR
DZR_2
DUF7559
Motif
Other DBs
NCBI-GeneID:
112142127
NCBI-ProteinID:
XP_024121133
Ensembl:
ENSOMEG00000008404
LinkDB
All DBs
Position
LG4:complement(171792..183368)
Genome browser
AA seq
319 aa
AA seq
DB search
MAEAPPWPSRFFCHRCSAEISPRLPEYTCPRCESGFIEELLDERSADNGSMSTISSGPQN
QQPFENVDQHLFTFPSGYGQFSLSVFDDSFDFAGGLRPEDNRDAENRRERETASRQRYGA
RQPRTRHSARRQTGRHEGVPTLEGIIQQLVNGIIAPTAMPNIGVGPWGILHSNPMDYAWG
ANGLDAIITQLLNQFENTGPPPADRDKIKSLPTVQVTDEHVASGLECPVCKEDYSVGENV
RQLPCNHMFHNDCIVPWLEQHDTCPVCRKSLSGQNTATNPPDLSGMNFTASPSSSSSSSS
SSTPQSSTSTSNENSTDNS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctcccccatggcctagccggttcttctgtcacagatgctccgcagagatt
agccctcggctccccgagtacacgtgtcccagatgtgagtctgggttcatcgaggagctg
ctggatgagaggagtgctgacaatggctccatgtccacaatctccagcgggccccagaac
caacaaccttttgagaatgtggaccagcacttattcacattcccatcaggctacggtcag
ttctccctcagcgtctttgacgacagcttcgacttcgccggggggcttagaccggaggac
aacagggatgcagagaaccgccgggaacgggaaacggcgtcccggcagcgatacggcgcc
agacaacccagaactcgtcacagtgcacggcggcaaaccgggaggcacgaaggagttcct
actttagagggaatcatccagcagttggtaaatgggataattgcacccactgcaatgcca
aatatcggtgttggaccctggggaattcttcattcaaaccctatggactacgcctggggg
gccaacggcctcgatgccattataactcagttattaaaccagtttgagaacacgggtccg
ccgcccgccgacagggataaaatcaagagtcttcctacggtccaagtcacagacgagcat
gttgcctctggactggaatgcccggtgtgtaaagaagattacagtgttggagaaaacgtc
aggcagctcccgtgtaatcacatgttccacaatgactgcatcgtcccctggctggagcag
cacgacacgtgtccggtgtgcaggaaaagcttaagcgggcaaaacacggcaacaaacccc
cccgatctatcagggatgaactttaccgcctccccttcatcctcctcctcctcctcctcc
tcctccaccccccagtcatcgacttccaccagcaacgagaactccaccgataactcatag
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