Oryzias melastigma (Indian medaka): 112142130
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Entry
112142130 CDS
T07439
Symbol
hcn2b
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112142130 (hcn2b)
Ion channels [BR:
oml04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
112142130 (hcn2b)
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Microp_apicomplexa_15
Ion_trans_2
LPD1
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
112142130
NCBI-ProteinID:
XP_024121143
Ensembl:
ENSOMEG00000008323
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All DBs
Position
LG4:complement(127499..157666)
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AA seq
935 aa
AA seq
DB search
MLCNKNGDCRRDPATSGSLSSLISRQEGPPDGAVTGEDGGGPAAGMDGPVTSAGPPARGP
GPEVKSAAATERKDPRVSFSSPPAGKGQSARPSVTFSKAEDGSAVGPEDGESRGNQTYMQ
RQFSSMLQPGVNKFSLRMFGSQKAVEKEQERVKSAGNWIIHPYSDFRFYWDFTMLMFMVG
NLIIIPVGITFFKDETSTPWIIFNVVSDTFFLMDLVLNFRTGIVFEDNTEIILDPEKIKR
KYLKSWFVVDFVSSIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLI
RYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVSLNS
MVNDTWSELYSFALFKAMSHMLCIGYGRQAPESMSDIWLTMLSMIIGATCYAMFIGHATA
LIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEESILEELNE
PLREEIINFNCRKLVASMPLFANADPNFVTAMLTKLRFEVFQPGDYIIREGTIGKKMYFI
QHGVVSILTKGNISMKLMDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEE
YPMMRRAFETVAIDRLDRIGKKNSILMHKVQHDLNSGVFNNRENEMIQEIVKYDREMVQQ
ATPPLPAGVFAPPPAQPRDSAVATLQQAVAMNFCPPMPPGGALQSPRRVRRLQAVQGVSS
PASASPLQSQILASGAFAPVLASPPIRSPLAAGGRSFQYGSGHMSGSQLSLGQQHLSSPP
HRPGARSLQTGPLNQDGRALSASQPSLPHVGPQPGAPSPPQSTHVSSTSIGPPQHAAAQS
GLQSSLPPPHQASAGAFPGLSLPASFHGFTTAGGADTGPGGADTGPGGADTGPGGADTGP
GGADTGPGGSGPPRKDSEPRERDHVKVRTRLSSNL
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgctatgcaacaagaacggagactgtcgacgggatccggccacttcggggagcctgtcg
tcgctcatctcccggcaggaggggccgccggatggggccgtaacgggagaggacggcggg
ggtccggccgccggtatggacggccccgtcacctcagcggggcccccagcgcggggcccg
gggccggaggtcaagagcgcagcggccacggagaggaaagaccccagagtttccttctcc
agcccccccgccgggaaagggcagagcgcgcggccctccgtgaccttctccaaggcggag
gacggctccgcggtcggcccggaggacggagagtcccgggggaaccagacgtacatgcag
cggcagttcagctccatgctgcagcccggggtcaacaaattctctctgcgcatgttcggt
agccagaaggcggtggagaaggagcaggagcgcgtaaagtccgcgggaaactggatcatc
catccgtacagcgacttcaggttttattgggacttcaccatgctgatgttcatggtgggg
aacctgatcatcattcccgtgggcatcaccttcttcaaggacgagacctccacgccctgg
atcatcttcaacgtggtctccgacaccttcttcctcatggatctggtgctcaacttcagg
accgggatcgtgttcgaggacaacacggagatcatcctggaccccgagaagatcaagagg
aagtacctgaagagctggtttgtggtggactttgtgtcttccatccctgtggattacatc
ttcctgatcgtggagaaggggatcgactcggaggtgtacaagacggctcgggcgctccgg
atcgtccgcttcaccaaaatcctcagtctgctgcggctgctgcggctgtccagactcatc
cgatacatccaccagtgggaggagatcttccacatgacctatgacctggccagcgctgtg
gtgcggatcttcaacctgatcgggatgatgctgctcttgtgccactgggacggctgcctc
cagttcctggttcccatgctgcaggacttccctcccgactgctgggtttccctcaacagc
atggtgaacgacacctggagcgagctctactccttcgcgctcttcaaggccatgagtcac
atgctgtgcatcggctacggccggcaggccccggagagcatgtccgacatctggctgacc
atgctgagcatgatcatcggagccacctgctacgccatgttcatcggccacgccacggcg
ctcatccagtcgctggactcctccagacggcagtaccaggagaagtataagcaggtggag
cagtacatgtccttccacaaactacccgccgacttccggcagaaaatccacgactactac
gagcaccgataccagggcaagatgtttgatgaggagagcatcctggaggagctgaacgag
cctctgcgggaggaaatcatcaactttaactgccgtaagctggtggcctccatgccgctg
ttcgccaacgccgaccccaacttcgtgacggccatgctgaccaaactgcggtttgaagtc
ttccagcccggagactacatcatcagggagggcaccatcggcaagaagatgtacttcatc
cagcacggcgtggtgagcatcctgaccaaggggaacatcagcatgaagctgatggacgga
tcctacttcggagagatctgcctgctgacccgcggccggcggaccgccagcgtgcgagcg
gacacctactgccgcctctactctctgtctgtggacaacttcaacgaggttctggaggag
taccccatgatgaggcgggccttcgagacggtcgccatcgacaggctggaccggatcggt
aaaaagaattccattctgatgcacaaagttcagcacgacctgaactccggcgttttcaac
aaccgagaaaacgagatgatccaggagatcgtcaaatacgaccgggagatggtccagcag
gccacgccccctctgcccgctggggtctttgctccgcctcctgctcagccccgggattca
gccgtggccacgctgcagcaggccgtcgccatgaacttctgcccccccatgccccccggg
ggggcgctgcagtccccccggagggtgcgcagactccaggcggtgcagggcgtgtccagc
cccgcctccgcgtcccctctgcagtcccaaatcctcgcctctggtgcctttgcccccgtg
ctggccagcccccccatccggagccctctggcggcggggggccgctcgttccagtacggc
tccggtcacatgtcgggctcccagctgtccctgggccagcagcacctctccagcccgcca
caccggcccggcgcccgctctctgcaaacgggccccctgaaccaggacgggagggccctc
tccgcctcccagccctccctgccccatgtggggcctcagccaggggcccccagtccccct
cagtccacccacgtgtcctccacctctatcggacccccccagcacgccgccgctcagtcc
ggtcttcagagctctctaccgcccccccaccaggcgtcagcgggggcttttcctggactc
tctctgcccgcttctttccacggcttcacaacagcggggggcgccgacacaggtccgggg
ggcgccgacacaggtccagggggcgccgacacaggtccagggggcgccgacacaggtccg
gggggcgccgacacaggtccggggggctcaggaccccccaggaaagactctgagcctcgt
gagcgggaccacgtcaaagtgagaaccagactctcctcgaacctgtga
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